BLASTX nr result

ID: Coptis23_contig00000253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000253
         (1817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281913.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vit...   385   e-134
ref|XP_002510329.1| multidrug resistance pump, putative [Ricinus...   384   e-134
ref|XP_003550360.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   382   e-133
ref|XP_003550359.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   382   e-133
gb|ABR16195.1| unknown [Picea sitchensis]                             382   e-132

>ref|XP_002281913.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vitis vinifera]
            gi|302142423|emb|CBI19626.3| unnamed protein product
            [Vitis vinifera]
          Length = 479

 Score =  385 bits (990), Expect(2) = e-134
 Identities = 189/313 (60%), Positives = 232/313 (74%)
 Frame = -2

Query: 1654 PLLTKKSDNAKEEETSLKADIWSEIKLIWFIAGPAILTSLFQYSLATVTQTMVGHIGTLE 1475
            PLL   +D   E+  S      +E K +W +AGPAI T++ QYSL  +TQT  G +G  E
Sbjct: 6    PLLNNHNDEDVEKPVSFPRKFCAESKKLWKLAGPAIFTAICQYSLGALTQTFAGLVGETE 65

Query: 1474 LAAFGMQNLFIAGIGFGVMLGMGSALETLCGQAYGAGRLNMMGIYMQRSWIILIFTGLVL 1295
            LAA  ++N  IAG+ FGVMLGMGSALETLCGQAYGAG++ M+GIYMQRSW+IL+ T   L
Sbjct: 66   LAAVSVENSVIAGLAFGVMLGMGSALETLCGQAYGAGKIRMLGIYMQRSWVILLTTACCL 125

Query: 1294 TVVYIFASPILKLLGQSAEISELAGKFAIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWI 1115
              +Y+FA PIL+L+G++ +ISE AG+FA+WMIPQLFAYALNFPIQKFLQAQ KV VMAWI
Sbjct: 126  VPIYVFAPPILELIGETTQISEAAGQFALWMIPQLFAYALNFPIQKFLQAQRKVFVMAWI 185

Query: 1114 SLASLVFHVFLSWVFIQKLEMGLAGAAITLNFSWWLLVLAQLTYILSGACKEAWSGFSWL 935
            S+  LV H  LSW+ I KL  GL GAA+ LN SWWL+V++QL YI       AWSGFS L
Sbjct: 186  SVVVLVIHAVLSWLLILKLGYGLVGAAVMLNLSWWLIVISQLLYIFITTSDGAWSGFSML 245

Query: 934  AFAELPGFIGLSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFMIP 755
            AFA+L GF+ LS ASAVMLCLE+W +M+L++  G   +P I VDA SICM+++ W  MI 
Sbjct: 246  AFADLYGFVKLSLASAVMLCLEFWYLMILVVITGRLKNPLIPVDAISICMNIQGWDAMIA 305

Query: 754  LGFTAAISVRVSN 716
            LGF AAISVRVSN
Sbjct: 306  LGFNAAISVRVSN 318



 Score =  122 bits (305), Expect(2) = e-134
 Identities = 66/156 (42%), Positives = 87/156 (55%)
 Frame = -3

Query: 624 NPKRARFSVWVMVMMAVVIQTIFAVMIFATKKDFPSIFTEDEWVMNKVTKIAPFLCVSIF 445
           N   A+F+V V+ + ++ I  I   ++FAT+  FP +FT    V +  TK+A  L V++ 
Sbjct: 324 NAPSAKFAVVVVSITSMTIGVICMAVVFATRDVFPYLFTTSTAVADLTTKLATLLGVTVL 383

Query: 444 LSSVQPVLSGVAIGAGWQAIVAYVNIGCYYLVGLATGAILGFKFHXXXXXXXXXXXXXXX 265
           L+S+QPVLSGVA+GAGWQ IVAY+NIGCYYLVGL  G +LGFKF                
Sbjct: 384 LNSLQPVLSGVAVGAGWQHIVAYINIGCYYLVGLPAGLLLGFKFGLGAEGIWGGMIGGIC 443

Query: 264 XXXXXXXXXXXXTDWEKEVSLARERVAAWGSSDAES 157
                       T+W KE   A  RV  WG S  E+
Sbjct: 444 LQTIILVGITSWTNWNKEAEEAESRVKKWGGSAGEN 479


>ref|XP_002510329.1| multidrug resistance pump, putative [Ricinus communis]
            gi|223551030|gb|EEF52516.1| multidrug resistance pump,
            putative [Ricinus communis]
          Length = 483

 Score =  384 bits (985), Expect(2) = e-134
 Identities = 185/303 (61%), Positives = 233/303 (76%)
 Frame = -2

Query: 1624 KEEETSLKADIWSEIKLIWFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLF 1445
            +E+  S+  +   E K +W +AGPAI TS+ QYSL  +TQT  G +G ++LAA  ++N  
Sbjct: 20   EEKPVSVLKEFSDESKRLWKLAGPAIFTSICQYSLGALTQTFAGLVGEVDLAAVSVENSV 79

Query: 1444 IAGIGFGVMLGMGSALETLCGQAYGAGRLNMMGIYMQRSWIILIFTGLVLTVVYIFASPI 1265
            IAG+ FGVMLGMGSALETLCGQAYGAG+L M+G+YMQRSW+IL+ T  +L  +Y+++ PI
Sbjct: 80   IAGLAFGVMLGMGSALETLCGQAYGAGQLRMLGVYMQRSWVILLTTACLLVPIYVWSPPI 139

Query: 1264 LKLLGQSAEISELAGKFAIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLVFHVF 1085
            L+L+G++ +ISE AGKFAIWM+PQLFAYA+NFPIQKFLQ+QSKV VMAWIS A LV H  
Sbjct: 140  LELIGETTQISEAAGKFAIWMLPQLFAYAVNFPIQKFLQSQSKVYVMAWISAAVLVLHAI 199

Query: 1084 LSWVFIQKLEMGLAGAAITLNFSWWLLVLAQLTYILSGACKEAWSGFSWLAFAELPGFIG 905
             SW+ I KL  GL GAAITLN SWW++V+AQL YI       AWSGF+WLAFA+L GF+ 
Sbjct: 200  FSWLLILKLGWGLTGAAITLNTSWWIIVIAQLLYIFITKSDGAWSGFTWLAFADLGGFVK 259

Query: 904  LSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFMIPLGFTAAISVR 725
            LS ASAVMLCLE+W +M+L++  G   +P I VDA SICM+++ W  MI LGF AAISVR
Sbjct: 260  LSLASAVMLCLEFWYLMILVVITGRLPNPLIPVDAISICMNLQGWDAMIALGFNAAISVR 319

Query: 724  VSN 716
            VSN
Sbjct: 320  VSN 322



 Score =  123 bits (309), Expect(2) = e-134
 Identities = 62/155 (40%), Positives = 90/155 (58%)
 Frame = -3

Query: 624 NPKRARFSVWVMVMMAVVIQTIFAVMIFATKKDFPSIFTEDEWVMNKVTKIAPFLCVSIF 445
           N +RA++SV V+ + ++ I  +   ++FAT+  FP +FT  + V  + TK+A  L +++ 
Sbjct: 328 NSRRAKYSVKVVSVTSISIGVVCMALVFATRDYFPYLFTTSDAVAKETTKLAVLLGITVL 387

Query: 444 LSSVQPVLSGVAIGAGWQAIVAYVNIGCYYLVGLATGAILGFKFHXXXXXXXXXXXXXXX 265
           L+S+QPVLSGVA+GAGWQ++VAY+NIGCYY+VGL  G +LGF F                
Sbjct: 388 LNSLQPVLSGVAVGAGWQSLVAYINIGCYYVVGLPAGILLGFTFGFGAMGVWSGMIGGIC 447

Query: 264 XXXXXXXXXXXXTDWEKEVSLARERVAAWGSSDAE 160
                       T+W KE   A  RV  WG + AE
Sbjct: 448 LQTIILIIVTSITNWNKEAEEAESRVKKWGGAAAE 482


>ref|XP_003550360.1| PREDICTED: protein TRANSPARENT TESTA 12-like isoform 2 [Glycine max]
          Length = 487

 Score =  382 bits (981), Expect(2) = e-133
 Identities = 187/307 (60%), Positives = 235/307 (76%), Gaps = 2/307 (0%)
 Frame = -2

Query: 1630 NAKEEET--SLKADIWSEIKLIWFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGM 1457
            N +EE+T  ++      E K +W IAGPAI+TS+ QYSL  +TQT  G +G L+LAA  +
Sbjct: 15   NVEEEKTPNTVVKRFGFESKKLWKIAGPAIVTSICQYSLGALTQTFAGLVGDLDLAAVSV 74

Query: 1456 QNLFIAGIGFGVMLGMGSALETLCGQAYGAGRLNMMGIYMQRSWIILIFTGLVLTVVYIF 1277
            +N  IAG+ FGVMLGMGSALETLCGQAYGAG++ M+G+YMQRSW+IL  T L+L  +YI+
Sbjct: 75   ENSVIAGLAFGVMLGMGSALETLCGQAYGAGQIRMLGVYMQRSWVILFITALILLPLYIW 134

Query: 1276 ASPILKLLGQSAEISELAGKFAIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLV 1097
            + PIL+L GQ+AEIS+ AGKFA+WMIPQLFAYA+NFPI KFLQAQ KV+VM WIS+  LV
Sbjct: 135  SPPILRLAGQTAEISDAAGKFAVWMIPQLFAYAINFPIVKFLQAQRKVLVMLWISVVVLV 194

Query: 1096 FHVFLSWVFIQKLEMGLAGAAITLNFSWWLLVLAQLTYILSGACKEAWSGFSWLAFAELP 917
             H F SW+ I KL  GL GAA+TLN SWW++V+AQL YI       AWSGF+WLAF++L 
Sbjct: 195  LHTFFSWLVIFKLGWGLIGAAVTLNTSWWVIVIAQLLYIFITKSDGAWSGFTWLAFSDLF 254

Query: 916  GFIGLSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFMIPLGFTAA 737
            GF+ LS ASAVMLCLE+W +M+L++  G  ++P I VDA SICM++  W  MI +GF AA
Sbjct: 255  GFVKLSLASAVMLCLEFWYLMILVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAA 314

Query: 736  ISVRVSN 716
            ISVRVSN
Sbjct: 315  ISVRVSN 321



 Score =  120 bits (300), Expect(2) = e-133
 Identities = 61/150 (40%), Positives = 84/150 (56%)
 Frame = -3

Query: 618 KRARFSVWVMVMMAVVIQTIFAVMIFATKKDFPSIFTEDEWVMNKVTKIAPFLCVSIFLS 439
           K A+FSVWV+ + +V I  +  + +  TK  FP +FT    V N+ T+++  L V++ L+
Sbjct: 329 KAAKFSVWVVSITSVSIGVVVMIGVLLTKDYFPYLFTTSVPVANETTRLSALLAVTVLLN 388

Query: 438 SVQPVLSGVAIGAGWQAIVAYVNIGCYYLVGLATGAILGFKFHXXXXXXXXXXXXXXXXX 259
           S+QPVLSGVA+GAGWQ++VAY+NI CYYLVGL  G ILGFK                   
Sbjct: 389 SLQPVLSGVAVGAGWQSLVAYINIVCYYLVGLPAGIILGFKLGLGAEGIWSGMIAGIVLQ 448

Query: 258 XXXXXXXXXXTDWEKEVSLARERVAAWGSS 169
                      +W+KE   A  RV  WG +
Sbjct: 449 TTILIIVTSIRNWKKEAEEAESRVRKWGGA 478


>ref|XP_003550359.1| PREDICTED: protein TRANSPARENT TESTA 12-like isoform 1 [Glycine max]
          Length = 483

 Score =  382 bits (981), Expect(2) = e-133
 Identities = 187/307 (60%), Positives = 235/307 (76%), Gaps = 2/307 (0%)
 Frame = -2

Query: 1630 NAKEEET--SLKADIWSEIKLIWFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGM 1457
            N +EE+T  ++      E K +W IAGPAI+TS+ QYSL  +TQT  G +G L+LAA  +
Sbjct: 15   NVEEEKTPNTVVKRFGFESKKLWKIAGPAIVTSICQYSLGALTQTFAGLVGDLDLAAVSV 74

Query: 1456 QNLFIAGIGFGVMLGMGSALETLCGQAYGAGRLNMMGIYMQRSWIILIFTGLVLTVVYIF 1277
            +N  IAG+ FGVMLGMGSALETLCGQAYGAG++ M+G+YMQRSW+IL  T L+L  +YI+
Sbjct: 75   ENSVIAGLAFGVMLGMGSALETLCGQAYGAGQIRMLGVYMQRSWVILFITALILLPLYIW 134

Query: 1276 ASPILKLLGQSAEISELAGKFAIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLV 1097
            + PIL+L GQ+AEIS+ AGKFA+WMIPQLFAYA+NFPI KFLQAQ KV+VM WIS+  LV
Sbjct: 135  SPPILRLAGQTAEISDAAGKFAVWMIPQLFAYAINFPIVKFLQAQRKVLVMLWISVVVLV 194

Query: 1096 FHVFLSWVFIQKLEMGLAGAAITLNFSWWLLVLAQLTYILSGACKEAWSGFSWLAFAELP 917
             H F SW+ I KL  GL GAA+TLN SWW++V+AQL YI       AWSGF+WLAF++L 
Sbjct: 195  LHTFFSWLVIFKLGWGLIGAAVTLNTSWWVIVIAQLLYIFITKSDGAWSGFTWLAFSDLF 254

Query: 916  GFIGLSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFMIPLGFTAA 737
            GF+ LS ASAVMLCLE+W +M+L++  G  ++P I VDA SICM++  W  MI +GF AA
Sbjct: 255  GFVKLSLASAVMLCLEFWYLMILVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAA 314

Query: 736  ISVRVSN 716
            ISVRVSN
Sbjct: 315  ISVRVSN 321



 Score =  120 bits (300), Expect(2) = e-133
 Identities = 61/150 (40%), Positives = 84/150 (56%)
 Frame = -3

Query: 618 KRARFSVWVMVMMAVVIQTIFAVMIFATKKDFPSIFTEDEWVMNKVTKIAPFLCVSIFLS 439
           K A+FSVWV+ + +V I  +  + +  TK  FP +FT    V N+ T+++  L V++ L+
Sbjct: 329 KAAKFSVWVVSITSVSIGVVVMIGVLLTKDYFPYLFTTSVPVANETTRLSALLAVTVLLN 388

Query: 438 SVQPVLSGVAIGAGWQAIVAYVNIGCYYLVGLATGAILGFKFHXXXXXXXXXXXXXXXXX 259
           S+QPVLSGVA+GAGWQ++VAY+NI CYYLVGL  G ILGFK                   
Sbjct: 389 SLQPVLSGVAVGAGWQSLVAYINIVCYYLVGLPAGIILGFKLGLGAEGIWSGMIAGIVLQ 448

Query: 258 XXXXXXXXXXTDWEKEVSLARERVAAWGSS 169
                      +W+KE   A  RV  WG +
Sbjct: 449 TTILIIVTSIRNWKKEAEEAESRVRKWGGA 478


>gb|ABR16195.1| unknown [Picea sitchensis]
          Length = 500

 Score =  382 bits (982), Expect(2) = e-132
 Identities = 179/298 (60%), Positives = 233/298 (78%)
 Frame = -2

Query: 1609 SLKADIWSEIKLIWFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLFIAGIG 1430
            SL    W E K +W+++GPAI TS+ QYSL  +TQT  GHIG LELAA  ++N  IAG+ 
Sbjct: 45   SLANGCWEESKKLWYLSGPAIFTSVCQYSLGALTQTFAGHIGELELAAVSIENSVIAGLS 104

Query: 1429 FGVMLGMGSALETLCGQAYGAGRLNMMGIYMQRSWIILIFTGLVLTVVYIFASPILKLLG 1250
            FG+M+GMGSALETLCGQ+ GA RL+++G+YMQRSWIIL+ T L+++++YIFA+PIL L+G
Sbjct: 105  FGIMMGMGSALETLCGQSVGARRLDLLGLYMQRSWIILLSTALIMSLIYIFATPILVLIG 164

Query: 1249 QSAEISELAGKFAIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLVFHVFLSWVF 1070
            Q  +I+++AGKFA+WM+PQLFAYA+NFP+ KFLQAQSKVMVM+ I+  +LV HV LSW+ 
Sbjct: 165  QQKDIADMAGKFAVWMLPQLFAYAMNFPLAKFLQAQSKVMVMSIIAGCALVVHVLLSWIL 224

Query: 1069 IQKLEMGLAGAAITLNFSWWLLVLAQLTYILSGACKEAWSGFSWLAFAELPGFIGLSCAS 890
            I K+  GL  AA+ LN SWW++VLAQ+ Y+ SGAC++AW+GFSW AF+ L  F+ LS AS
Sbjct: 225  IFKVGWGLPAAALVLNLSWWIIVLAQIGYVFSGACRDAWAGFSWSAFSNLGAFVRLSLAS 284

Query: 889  AVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFMIPLGFTAAISVRVSN 716
             VMLCLE W + +LI+ AG   +P I VDA SICM++  W FMI +GF  AISVRVSN
Sbjct: 285  GVMLCLEAWYLYLLILLAGYLKNPTIAVDAISICMNLMGWEFMIAIGFNIAISVRVSN 342



 Score =  117 bits (292), Expect(2) = e-132
 Identities = 58/151 (38%), Positives = 85/151 (56%)
 Frame = -3

Query: 621 PKRARFSVWVMVMMAVVIQTIFAVMIFATKKDFPSIFTEDEWVMNKVTKIAPFLCVSIFL 442
           P+ A+FSV V+V    ++  +   +IF T+ +F   FT+ + VM+ V ++AP L  ++ L
Sbjct: 349 PRAAKFSVIVVVGTTFLVGVVLMAIIFITRNEFAVAFTDSKVVMSAVAQLAPLLAFTMLL 408

Query: 441 SSVQPVLSGVAIGAGWQAIVAYVNIGCYYLVGLATGAILGFKFHXXXXXXXXXXXXXXXX 262
           +SVQPVLSGVAIGAGWQA+VAY+N+ CYYL G+  G +LG+ F                 
Sbjct: 409 NSVQPVLSGVAIGAGWQALVAYINLACYYLFGVPLGCLLGYYFDLGVEGIWAGMISGTLL 468

Query: 261 XXXXXXXXXXXTDWEKEVSLARERVAAWGSS 169
                      T W KE + A+ R+  WG +
Sbjct: 469 QTIILCIITYRTKWNKEANQAKARITLWGGA 499


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