BLASTX nr result

ID: Coptis23_contig00000197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000197
         (1325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]           619   e-175
ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...   619   e-175
ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vi...   618   e-175
ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tR...   617   e-174
emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]   617   e-174

>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score =  619 bits (1596), Expect = e-175
 Identities = 288/351 (82%), Positives = 325/351 (92%), Gaps = 2/351 (0%)
 Frame = -1

Query: 1268 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 1089
            ++LEE+FKIVRSIGEECIQEDELMNLL KKPQP+ YDGFEPSGRMHIAQG+LK +NVNKL
Sbjct: 58   MSLEEKFKIVRSIGEECIQEDELMNLLAKKPQPVCYDGFEPSGRMHIAQGVLKALNVNKL 117

Query: 1088 VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSDE 915
             SAGC+VKIW+ADWFAQLNNKMGGDLKKI  +G+YLIEIWKA GMNL+G  VEFLWSS E
Sbjct: 118  TSAGCKVKIWIADWFAQLNNKMGGDLKKIEVVGQYLIEIWKAVGMNLEGGHVEFLWSSKE 177

Query: 914  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 735
            INSRAHEYWPLVMD+ARRNKLPRI+RCCQIMGR+EQD+L+AAQIFYPCMQCADIFFLKAD
Sbjct: 178  INSRAHEYWPLVMDVARRNKLPRILRCCQIMGRSEQDELTAAQIFYPCMQCADIFFLKAD 237

Query: 734  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 555
            ICQLGMDQRKVNVLAREYCDDI+RKNKPIILSHHMLPGLQ+GQEKMSKSDPSSSIYMEDE
Sbjct: 238  ICQLGMDQRKVNVLAREYCDDIRRKNKPIILSHHMLPGLQEGQEKMSKSDPSSSIYMEDE 297

Query: 554  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 375
            EA+VN+KIKKA+CPP +V  NPCLEY+KYI+ P F +F++ER  +NG +KT+ +FEEL  
Sbjct: 298  EADVNLKIKKAFCPPKVVEKNPCLEYIKYIVLPWFNEFKIERSAENGADKTYKNFEELAA 357

Query: 374  DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 222
            DYE   LHPADLKPALSKA+NKILQPVRDHFKND KAKDL+K+VK+++VTR
Sbjct: 358  DYESGNLHPADLKPALSKAINKILQPVRDHFKNDQKAKDLMKRVKSFKVTR 408


>ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 387

 Score =  619 bits (1595), Expect = e-175
 Identities = 295/351 (84%), Positives = 324/351 (92%), Gaps = 2/351 (0%)
 Frame = -1

Query: 1268 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 1089
            L+LEE+++IVRS+GEECIQEDEL NLL+KKP+P+ YDGFEPSGRMHIAQG++K INVNKL
Sbjct: 37   LSLEEKYQIVRSVGEECIQEDELRNLLDKKPEPVCYDGFEPSGRMHIAQGVMKAINVNKL 96

Query: 1088 VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSDE 915
             SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA GM+L+G  VEFLWSS E
Sbjct: 97   TSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLEGGKVEFLWSSKE 156

Query: 914  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 735
            INSRA EYWPLVMDIARRNKLPRI+RC QIMGRNEQD+L+AAQI YPCMQCADIFFLKAD
Sbjct: 157  INSRAGEYWPLVMDIARRNKLPRIIRCSQIMGRNEQDELTAAQILYPCMQCADIFFLKAD 216

Query: 734  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 555
            ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MED+
Sbjct: 217  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDD 276

Query: 554  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 375
            EAEVN+KIKKAYCPP IV GNPCLEY+KY+IFP F +F VER  D+GGNKTF++FEELV 
Sbjct: 277  EAEVNLKIKKAYCPPLIVEGNPCLEYIKYLIFPWFKEFTVERNADHGGNKTFSTFEELVS 336

Query: 374  DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 222
            DY   +LHP DLKPALSKALNKIL+PVRDHFKND  AKDLLK+VKAYRVTR
Sbjct: 337  DYAAGELHPGDLKPALSKALNKILEPVRDHFKNDSNAKDLLKRVKAYRVTR 387


>ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vinifera]
            gi|297742518|emb|CBI34667.3| unnamed protein product
            [Vitis vinifera]
          Length = 385

 Score =  618 bits (1594), Expect = e-175
 Identities = 294/351 (83%), Positives = 322/351 (91%), Gaps = 2/351 (0%)
 Frame = -1

Query: 1268 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 1089
            +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI+VNKL
Sbjct: 35   MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTISVNKL 94

Query: 1088 VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSDE 915
             SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA GM+LDG  VEFLWSS E
Sbjct: 95   TSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDGGKVEFLWSSKE 154

Query: 914  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 735
            IN+RAHEYWP VMDIARRNKLPRI+RC QIMGR+EQ++LSAAQI YPCMQCADIFFLKAD
Sbjct: 155  INARAHEYWPRVMDIARRNKLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLKAD 214

Query: 734  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 555
            ICQLGMDQRKVNVLAREYCDDIK KNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDE
Sbjct: 215  ICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDE 274

Query: 554  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 375
            EAEVNVKIKKAYCPP +V GNPCLEYV YIIFP F +F+VER+ +NGG+K F S+EEL+ 
Sbjct: 275  EAEVNVKIKKAYCPPKVVEGNPCLEYVNYIIFPWFNEFKVERKAENGGDKIFKSYEELIA 334

Query: 374  DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 222
            DYE  +LHP DLKP+LSKALNKILQPVRDHF ND  AKDLLK+VKAYRVTR
Sbjct: 335  DYENGELHPGDLKPSLSKALNKILQPVRDHFANDSNAKDLLKRVKAYRVTR 385


>ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tRNA ligase-like [Cucumis
            sativus]
          Length = 387

 Score =  617 bits (1590), Expect = e-174
 Identities = 294/351 (83%), Positives = 323/351 (92%), Gaps = 2/351 (0%)
 Frame = -1

Query: 1268 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 1089
            L+LEE+++IVRS+GEECIQEDEL NLL+KKP+P+ YDGFEPSGRMHIAQG++K INVNKL
Sbjct: 37   LSLEEKYQIVRSVGEECIQEDELRNLLDKKPEPVCYDGFEPSGRMHIAQGVMKAINVNKL 96

Query: 1088 VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSDE 915
             SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA GM+L+G  VEFLWSS E
Sbjct: 97   TSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLEGGKVEFLWSSKE 156

Query: 914  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 735
            INSRA EYWPLVMDIARRNKLPRI+RC QIMGRNEQD+L+AAQI YPCMQCADIFFLKAD
Sbjct: 157  INSRAGEYWPLVMDIARRNKLPRIIRCSQIMGRNEQDELTAAQILYPCMQCADIFFLKAD 216

Query: 734  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 555
            ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MED+
Sbjct: 217  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDD 276

Query: 554  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 375
            EAEVN+KIKKAYCPP IV GNPCLEY+KY+ FP F +F VER  D+GGNKTF++FEELV 
Sbjct: 277  EAEVNLKIKKAYCPPLIVEGNPCLEYIKYLXFPWFKEFTVERNADHGGNKTFSTFEELVS 336

Query: 374  DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 222
            DY   +LHP DLKPALSKALNKIL+PVRDHFKND  AKDLLK+VKAYRVTR
Sbjct: 337  DYAAGELHPGDLKPALSKALNKILEPVRDHFKNDSNAKDLLKRVKAYRVTR 387


>emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]
          Length = 385

 Score =  617 bits (1590), Expect = e-174
 Identities = 293/351 (83%), Positives = 322/351 (91%), Gaps = 2/351 (0%)
 Frame = -1

Query: 1268 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTINVNKL 1089
            +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI+VNKL
Sbjct: 35   MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTISVNKL 94

Query: 1088 VSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKAAGMNLDG--VEFLWSSDE 915
             SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA GM+LDG  VEFLWSS E
Sbjct: 95   TSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDGGKVEFLWSSKE 154

Query: 914  INSRAHEYWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKAD 735
            IN+RAHEYWP VMDIARRNKLPRI+RC QIMGR+EQ++LSAAQI YPCMQCADIFFLKAD
Sbjct: 155  INARAHEYWPRVMDIARRNKLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLKAD 214

Query: 734  ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDE 555
            ICQLGMDQRKVNVLAREYCDDIK KNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDE
Sbjct: 215  ICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDE 274

Query: 554  EAEVNVKIKKAYCPPNIVNGNPCLEYVKYIIFPSFGKFEVERREDNGGNKTFTSFEELVV 375
            EAEVNVKIKKAYCPP +V GNPCLEYV YIIFP F +F+VER+ +NGG+K F S++EL+ 
Sbjct: 275  EAEVNVKIKKAYCPPKVVEGNPCLEYVNYIIFPWFNEFKVERKAENGGDKIFKSYKELIA 334

Query: 374  DYEEEKLHPADLKPALSKALNKILQPVRDHFKNDPKAKDLLKKVKAYRVTR 222
            DYE  +LHP DLKP+LSKALNKILQPVRDHF ND  AKDLLK+VKAYRVTR
Sbjct: 335  DYENGELHPGDLKPSLSKALNKILQPVRDHFANDSNAKDLLKRVKAYRVTR 385


Top