BLASTX nr result
ID: Coptis23_contig00000172
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00000172 (523 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding p... 80 1e-17 ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|2... 82 2e-17 emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera] 78 5e-17 ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding p... 76 1e-15 emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera] 76 1e-15 >ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Vitis vinifera] Length = 439 Score = 80.5 bits (197), Expect(2) = 1e-17 Identities = 42/92 (45%), Positives = 62/92 (67%), Gaps = 2/92 (2%) Frame = -1 Query: 523 GLTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTMNS--PSFQQREDKIEDTEIQEE 350 G+ + L +E+ K LW+++DTDR+G+IDL Q++ + PS Q+ED E+ +E Sbjct: 326 GVCGSSHSDLCNEDTKKLWEHLDTDRNGVIDLLQYSRAENLHPSLLQKEDTEENGGQIKE 385 Query: 349 ILPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254 + + S +T IGF+VKNA+LFPPEVE GMWP Sbjct: 386 MF-NTSTSTTMIGFNVKNAMLFPPEVEKGMWP 416 Score = 34.3 bits (77), Expect(2) = 1e-17 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = -2 Query: 165 YSLSDHAHLTVEFAPMMIHC 106 YSLSDHAHLTVEF+ + ++C Sbjct: 419 YSLSDHAHLTVEFSLVEMNC 438 >ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|222858503|gb|EEE96050.1| predicted protein [Populus trichocarpa] Length = 451 Score = 82.4 bits (202), Expect(2) = 2e-17 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 2/91 (2%) Frame = -1 Query: 520 LTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTM--NSPSFQQREDKIEDTEIQEEI 347 LT +C YGLSDEE KDLW D D +G++D +F N ++++D+I+D + Sbjct: 342 LTGHC-YGLSDEETKDLWVQADIDGNGVLDYKEFQQRIWNPTWSEEKDDEIQDDNL---- 396 Query: 346 LPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254 K + TIGF V+NAVLFPPEVE GMWP Sbjct: 397 ---KGREEQTIGFSVENAVLFPPEVEKGMWP 424 Score = 31.6 bits (70), Expect(2) = 2e-17 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 165 YSLSDHAHLTVEFAPMMIHC 106 YSLSDHA LTV F+P+ + C Sbjct: 427 YSLSDHARLTVVFSPIRMPC 446 >emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera] Length = 435 Score = 78.2 bits (191), Expect(2) = 5e-17 Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 2/92 (2%) Frame = -1 Query: 523 GLTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTMNS--PSFQQREDKIEDTEIQEE 350 G+ + L +E+ K LW+++DTDR+G+IDL Q++ + P Q+ED E+ +E Sbjct: 322 GVCGSSHSDLCNEDTKKLWEHLDTDRNGVIDLLQYSRAENLYPLLLQKEDTEENGGQIKE 381 Query: 349 ILPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254 + + S +T IGF+VKNA+LFPPEVE GMWP Sbjct: 382 MF-NTSTSTTMIGFNVKNAMLFPPEVEKGMWP 412 Score = 34.3 bits (77), Expect(2) = 5e-17 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = -2 Query: 165 YSLSDHAHLTVEFAPMMIHC 106 YSLSDHAHLTVEF+ + ++C Sbjct: 415 YSLSDHAHLTVEFSLVEMNC 434 >ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding protein At1g02270 [Vitis vinifera] gi|302144002|emb|CBI23107.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 76.3 bits (186), Expect(2) = 1e-15 Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 2/91 (2%) Frame = -1 Query: 520 LTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTM--NSPSFQQREDKIEDTEIQEEI 347 LT +C +GLSDEEI DLW D D +G++D +F N QQR++ I E +E+ Sbjct: 339 LTGHC-HGLSDEEINDLWVQADIDGNGVLDYKEFQKRIWNPTWSQQRDENIN--EAWDEV 395 Query: 346 LPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254 + K IGF VKNAVLFP EVE GMWP Sbjct: 396 M--KGPKEQAIGFSVKNAVLFPSEVEKGMWP 424 Score = 31.6 bits (70), Expect(2) = 1e-15 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 165 YSLSDHAHLTVEFAPMMIHC 106 YSLSDHA LTV F+P+ + C Sbjct: 427 YSLSDHARLTVVFSPVRMPC 446 >emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera] Length = 445 Score = 76.3 bits (186), Expect(2) = 1e-15 Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 2/91 (2%) Frame = -1 Query: 520 LTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTM--NSPSFQQREDKIEDTEIQEEI 347 LT +C +GLSDEEI DLW D D +G++D +F N QQR++ I E +E+ Sbjct: 333 LTGHC-HGLSDEEINDLWVQADIDGNGVLDYKEFQKRIWNPTWSQQRDENIN--EAWDEV 389 Query: 346 LPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254 + K IGF VKNAVLFP EVE GMWP Sbjct: 390 M--KGPKEQAIGFSVKNAVLFPSEVEKGMWP 418 Score = 31.6 bits (70), Expect(2) = 1e-15 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 165 YSLSDHAHLTVEFAPMMIHC 106 YSLSDHA LTV F+P+ + C Sbjct: 421 YSLSDHARLTVVFSPVRMPC 440