BLASTX nr result

ID: Coptis23_contig00000172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000172
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding p...    80   1e-17
ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-17
emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera]    78   5e-17
ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding p...    76   1e-15
emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera]    76   1e-15

>ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding protein At1g02270-like
           [Vitis vinifera]
          Length = 439

 Score = 80.5 bits (197), Expect(2) = 1e-17
 Identities = 42/92 (45%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
 Frame = -1

Query: 523 GLTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTMNS--PSFQQREDKIEDTEIQEE 350
           G+  +    L +E+ K LW+++DTDR+G+IDL Q++   +  PS  Q+ED  E+    +E
Sbjct: 326 GVCGSSHSDLCNEDTKKLWEHLDTDRNGVIDLLQYSRAENLHPSLLQKEDTEENGGQIKE 385

Query: 349 ILPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254
           +  + S  +T IGF+VKNA+LFPPEVE GMWP
Sbjct: 386 MF-NTSTSTTMIGFNVKNAMLFPPEVEKGMWP 416



 Score = 34.3 bits (77), Expect(2) = 1e-17
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -2

Query: 165 YSLSDHAHLTVEFAPMMIHC 106
           YSLSDHAHLTVEF+ + ++C
Sbjct: 419 YSLSDHAHLTVEFSLVEMNC 438


>ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|222858503|gb|EEE96050.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 82.4 bits (202), Expect(2) = 2e-17
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = -1

Query: 520 LTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTM--NSPSFQQREDKIEDTEIQEEI 347
           LT +C YGLSDEE KDLW   D D +G++D  +F     N    ++++D+I+D  +    
Sbjct: 342 LTGHC-YGLSDEETKDLWVQADIDGNGVLDYKEFQQRIWNPTWSEEKDDEIQDDNL---- 396

Query: 346 LPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254
              K +   TIGF V+NAVLFPPEVE GMWP
Sbjct: 397 ---KGREEQTIGFSVENAVLFPPEVEKGMWP 424



 Score = 31.6 bits (70), Expect(2) = 2e-17
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -2

Query: 165 YSLSDHAHLTVEFAPMMIHC 106
           YSLSDHA LTV F+P+ + C
Sbjct: 427 YSLSDHARLTVVFSPIRMPC 446


>emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera]
          Length = 435

 Score = 78.2 bits (191), Expect(2) = 5e-17
 Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = -1

Query: 523 GLTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTMNS--PSFQQREDKIEDTEIQEE 350
           G+  +    L +E+ K LW+++DTDR+G+IDL Q++   +  P   Q+ED  E+    +E
Sbjct: 322 GVCGSSHSDLCNEDTKKLWEHLDTDRNGVIDLLQYSRAENLYPLLLQKEDTEENGGQIKE 381

Query: 349 ILPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254
           +  + S  +T IGF+VKNA+LFPPEVE GMWP
Sbjct: 382 MF-NTSTSTTMIGFNVKNAMLFPPEVEKGMWP 412



 Score = 34.3 bits (77), Expect(2) = 5e-17
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -2

Query: 165 YSLSDHAHLTVEFAPMMIHC 106
           YSLSDHAHLTVEF+ + ++C
Sbjct: 415 YSLSDHAHLTVEFSLVEMNC 434


>ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding protein At1g02270 [Vitis
           vinifera] gi|302144002|emb|CBI23107.3| unnamed protein
           product [Vitis vinifera]
          Length = 451

 Score = 76.3 bits (186), Expect(2) = 1e-15
 Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = -1

Query: 520 LTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTM--NSPSFQQREDKIEDTEIQEEI 347
           LT +C +GLSDEEI DLW   D D +G++D  +F     N    QQR++ I   E  +E+
Sbjct: 339 LTGHC-HGLSDEEINDLWVQADIDGNGVLDYKEFQKRIWNPTWSQQRDENIN--EAWDEV 395

Query: 346 LPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254
           +  K      IGF VKNAVLFP EVE GMWP
Sbjct: 396 M--KGPKEQAIGFSVKNAVLFPSEVEKGMWP 424



 Score = 31.6 bits (70), Expect(2) = 1e-15
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -2

Query: 165 YSLSDHAHLTVEFAPMMIHC 106
           YSLSDHA LTV F+P+ + C
Sbjct: 427 YSLSDHARLTVVFSPVRMPC 446


>emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera]
          Length = 445

 Score = 76.3 bits (186), Expect(2) = 1e-15
 Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = -1

Query: 520 LTSNCPYGLSDEEIKDLWDYVDTDRDGIIDLSQFNTM--NSPSFQQREDKIEDTEIQEEI 347
           LT +C +GLSDEEI DLW   D D +G++D  +F     N    QQR++ I   E  +E+
Sbjct: 333 LTGHC-HGLSDEEINDLWVQADIDGNGVLDYKEFQKRIWNPTWSQQRDENIN--EAWDEV 389

Query: 346 LPDKSKISTTIGFDVKNAVLFPPEVEHGMWP 254
           +  K      IGF VKNAVLFP EVE GMWP
Sbjct: 390 M--KGPKEQAIGFSVKNAVLFPSEVEKGMWP 418



 Score = 31.6 bits (70), Expect(2) = 1e-15
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -2

Query: 165 YSLSDHAHLTVEFAPMMIHC 106
           YSLSDHA LTV F+P+ + C
Sbjct: 421 YSLSDHARLTVVFSPVRMPC 440


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