BLASTX nr result

ID: Coptis23_contig00000171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000171
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding p...    93   3e-17
emb|CBI28273.3| unnamed protein product [Vitis vinifera]               93   3e-17
emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera]    87   1e-15
ref|XP_002302684.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002515120.1| carbon catabolite repressor protein, putativ...    83   2e-14

>ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding protein At1g02270-like
           [Vitis vinifera]
          Length = 439

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/88 (50%), Positives = 55/88 (62%)
 Frame = +2

Query: 5   DSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXXESFIEAVLGNIKTHLSEESVES 184
           D D D++KW+SHRNHRGN+C VDFIW            ESF+EA+LGNI   L + S  S
Sbjct: 240 DIDEDSHKWISHRNHRGNVCGVDFIWLLNPNKHRKPLKESFMEALLGNITNLLQKASTGS 299

Query: 185 ADQIHVLRTKFNNSNYITYSQFCQSLIK 268
            D +H       + +YITYSQFCQ+L K
Sbjct: 300 VDPLHFFEM---DGSYITYSQFCQALAK 324


>emb|CBI28273.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/88 (50%), Positives = 55/88 (62%)
 Frame = +2

Query: 5   DSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXXESFIEAVLGNIKTHLSEESVES 184
           D D D++KW+SHRNHRGN+C VDFIW            ESF+EA+LGNI   L + S  S
Sbjct: 240 DIDEDSHKWISHRNHRGNVCGVDFIWLLNPNKHRKPLKESFMEALLGNITNLLQKASTGS 299

Query: 185 ADQIHVLRTKFNNSNYITYSQFCQSLIK 268
            D +H       + +YITYSQFCQ+L K
Sbjct: 300 VDPLHFFEM---DGSYITYSQFCQALAK 324


>emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera]
          Length = 435

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/88 (48%), Positives = 55/88 (62%)
 Frame = +2

Query: 5   DSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXXESFIEAVLGNIKTHLSEESVES 184
           D D D++KW+SHRNHRGN+C VDFIW            ESF+EA+LGNI    ++ S  S
Sbjct: 240 DIDEDSHKWISHRNHRGNVCGVDFIWLLNPNKHRKPLKESFMEALLGNI----TKASTGS 295

Query: 185 ADQIHVLRTKFNNSNYITYSQFCQSLIK 268
            D +H       + +YITYSQFCQ+L K
Sbjct: 296 VDPLHFFEM---DGSYITYSQFCQALAK 320


>ref|XP_002302684.1| predicted protein [Populus trichocarpa] gi|222844410|gb|EEE81957.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/87 (49%), Positives = 54/87 (62%)
 Frame = +2

Query: 2   TDSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXXESFIEAVLGNIKTHLSEESVE 181
           TDS ADA++WVSHRNHRGNIC VDFIW            +S+ EAV G IK  L + S+ 
Sbjct: 37  TDSYADAHRWVSHRNHRGNICGVDFIWLCNSIKSRKPLKKSWSEAVFGIIKCQLQKASLV 96

Query: 182 SADQIHVLRTKFNNSNYITYSQFCQSL 262
             D    L+   N+ N+ITYS FC++L
Sbjct: 97  EKDAFAFLKAD-NHGNFITYSAFCEAL 122


>ref|XP_002515120.1| carbon catabolite repressor protein, putative [Ricinus communis]
           gi|223545600|gb|EEF47104.1| carbon catabolite repressor
           protein, putative [Ricinus communis]
          Length = 471

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/87 (49%), Positives = 51/87 (58%)
 Frame = +2

Query: 2   TDSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXXESFIEAVLGNIKTHLSEESVE 181
           TDSDADA+KWVSHRNHRGNIC VDFIW             S+ EAV G IK  L + S+ 
Sbjct: 268 TDSDADAHKWVSHRNHRGNICGVDFIWLRNPNKSKKPLKTSWYEAVFGIIKCQLLKASLT 327

Query: 182 SADQIHVLRTKFNNSNYITYSQFCQSL 262
             D    L+      ++ITYS FC+ L
Sbjct: 328 ENDAFAFLKAD-EPGDFITYSAFCEGL 353


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