BLASTX nr result

ID: Coptis23_contig00000149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000149
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein A...   350   3e-94
emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]   348   1e-93
ref|XP_002520111.1| homeobox protein, putative [Ricinus communis...   341   2e-91
ref|NP_001242687.1| uncharacterized protein LOC100801479 [Glycin...   333   5e-89
ref|NP_001242266.1| uncharacterized protein LOC100808033 [Glycin...   323   3e-86

>ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
            vinifera]
          Length = 285

 Score =  350 bits (899), Expect = 3e-94
 Identities = 181/255 (70%), Positives = 203/255 (79%), Gaps = 8/255 (3%)
 Frame = -3

Query: 1044 SLNPILPLCTSQDFHGVASLLGKRSMSFSGIE-----NVDEDLSDDGSQAGEKKRRLSME 880
            SLNPILP C  QDFHGVASLLGKRSMSFSGI+     N ++DLSDDGSQAGEKKRRL+ME
Sbjct: 28   SLNPILPSCAPQDFHGVASLLGKRSMSFSGIDVCEETNGEDDLSDDGSQAGEKKRRLNME 87

Query: 879  QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDILKRQ 700
            QVKTLEKNFELGNKLEPERKMQLARALGLQPRQ+AIWFQNRRARWKTKQLEKDYD+LKRQ
Sbjct: 88   QVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQ 147

Query: 699  FDAIKADNDTLQAQNKKLQSRILALKGREPTESINLN-KETEGXXXXXXXXXXXXXXXXX 523
            F+A+KA+ND LQAQN+KL + +LALK REPTESINLN KETEG                 
Sbjct: 148  FEAVKAENDALQAQNQKLHAEMLALKSREPTESINLNIKETEGSCSNRSENSSDIKLDIS 207

Query: 522  RTPATDSPLSSNP-GRPLFPTSLRPTSVIQLLQN-SSRMDAHCQKIQNQIQEESICNIFN 349
            RTPA DSPLS++P  RPLFP+S+RP  V+QL QN SSR D  CQK+   ++EES CN+F 
Sbjct: 208  RTPAIDSPLSTHPTSRPLFPSSIRPAGVVQLFQNSSSRPDLQCQKMDQPVKEESFCNMFC 267

Query: 348  AIDDHPSFWPWSENQ 304
             +DD   FWPW E Q
Sbjct: 268  GMDDQSGFWPWLEQQ 282


>emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score =  348 bits (893), Expect = 1e-93
 Identities = 180/255 (70%), Positives = 202/255 (79%), Gaps = 8/255 (3%)
 Frame = -3

Query: 1044 SLNPILPLCTSQDFHGVASLLGKRSMSFSGIE-----NVDEDLSDDGSQAGEKKRRLSME 880
            SLNPILP C  QDFHGVASLLGKRSMSFSGI+     N ++DLSDDGSQAGEKKRRL+ME
Sbjct: 28   SLNPILPSCAPQDFHGVASLLGKRSMSFSGIDVCEETNGEDDLSDDGSQAGEKKRRLNME 87

Query: 879  QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDILKRQ 700
            QVKTLEKNFELGNKLEPERKM LARALGLQPRQ+AIWFQNRRARWKTKQLEKDYD+LKRQ
Sbjct: 88   QVKTLEKNFELGNKLEPERKMXLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQ 147

Query: 699  FDAIKADNDTLQAQNKKLQSRILALKGREPTESINLN-KETEGXXXXXXXXXXXXXXXXX 523
            F+A+KA+ND LQAQN+KL + +LALK REPTESINLN KETEG                 
Sbjct: 148  FEAVKAENDALQAQNQKLHAEMLALKSREPTESINLNIKETEGSCSNRSENSSDIKLDIS 207

Query: 522  RTPATDSPLSSNP-GRPLFPTSLRPTSVIQLLQN-SSRMDAHCQKIQNQIQEESICNIFN 349
            RTPA DSPLS++P  RPLFP+S+RP  V+QL QN SSR D  CQK+   ++EES CN+F 
Sbjct: 208  RTPAIDSPLSTHPTSRPLFPSSIRPAGVVQLFQNSSSRPDLQCQKMDQPVKEESFCNMFC 267

Query: 348  AIDDHPSFWPWSENQ 304
             +DD   FWPW E Q
Sbjct: 268  GMDDQSGFWPWLEQQ 282


>ref|XP_002520111.1| homeobox protein, putative [Ricinus communis]
            gi|223540603|gb|EEF42166.1| homeobox protein, putative
            [Ricinus communis]
          Length = 296

 Score =  341 bits (874), Expect = 2e-91
 Identities = 182/265 (68%), Positives = 202/265 (76%), Gaps = 18/265 (6%)
 Frame = -3

Query: 1044 SLNPILPLCTSQDFHGVASLLGKRSMSFSGIE-------NVDEDLSDDGSQAGEKKRRLS 886
            SLNPILP CT+ DFHGVAS LGKRSMS SGI+       N ++DLSDDGSQAGEKKRRL+
Sbjct: 29   SLNPILPSCTTHDFHGVASFLGKRSMSCSGIDASCHEEANGEDDLSDDGSQAGEKKRRLN 88

Query: 885  MEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDILK 706
            MEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQ+AIWFQNRRARWKTKQLEKDYD+LK
Sbjct: 89   MEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLK 148

Query: 705  RQFDAIKADNDTLQAQNKKLQSRILALKGREPTESINLNKETEGXXXXXXXXXXXXXXXX 526
            RQF+AIKADND LQAQN+KL + I+ALK REPTESINLNKETEG                
Sbjct: 149  RQFEAIKADNDALQAQNQKLHAEIMALKSREPTESINLNKETEGSCSNRSENSSDIKLDI 208

Query: 525  XRTPATDSPLSSNP--GRPLFP--TSLRPTSVIQLLQN--SSRMDAH-----CQKIQNQI 379
             RTPA DSPLS++P   RPLFP  +S+RPT V  L  N  SSR D+H     CQKI   +
Sbjct: 209  SRTPAIDSPLSNHPITSRPLFPSSSSIRPTGVAHLFHNSSSSRPDSHHHNIQCQKIDQMV 268

Query: 378  QEESICNIFNAIDDHPSFWPWSENQ 304
            +EES+ N+F  IDD   FWPW E Q
Sbjct: 269  KEESLSNMFCGIDDQSGFWPWLEQQ 293


>ref|NP_001242687.1| uncharacterized protein LOC100801479 [Glycine max]
            gi|255636723|gb|ACU18697.1| unknown [Glycine max]
          Length = 279

 Score =  333 bits (853), Expect = 5e-89
 Identities = 173/254 (68%), Positives = 194/254 (76%), Gaps = 7/254 (2%)
 Frame = -3

Query: 1044 SLNPILPLCTSQDFHGVASLLGKRSMSFSGIE-----NVDEDLSDDGSQAGEKKRRLSME 880
            SLN I+  C  Q++HG AS LGKRSMSFSGIE     N +EDLSDDGSQAGEKKRRL+ME
Sbjct: 23   SLNSIITSCAPQEYHGGASFLGKRSMSFSGIELGEEANAEEDLSDDGSQAGEKKRRLNME 82

Query: 879  QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDILKRQ 700
            QVKTLEK+FELGNKLEPERKMQLARALGLQPRQ+AIWFQNRRARWKTKQLEKDYD+LKRQ
Sbjct: 83   QVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQ 142

Query: 699  FDAIKADNDTLQAQNKKLQSRILALKGREPTESINLNKETEGXXXXXXXXXXXXXXXXXR 520
            +DAIKADND LQAQN+KLQ+ ILALK REPTESINLNKETEG                 R
Sbjct: 143  YDAIKADNDALQAQNQKLQTEILALKNREPTESINLNKETEGSSSNRSENSSEIKLDISR 202

Query: 519  TPATDSPLSS--NPGRPLFPTSLRPTSVIQLLQNSSRMDAHCQKIQNQIQEESICNIFNA 346
            TPA DSPLS+  +  R LFP+S RPT V QL Q + R +  CQKI + ++EES+ N+F  
Sbjct: 203  TPAIDSPLSTQQSNSRTLFPSSARPTGVAQLFQTTPRPEIQCQKIDHMVKEESLSNMFCG 262

Query: 345  IDDHPSFWPWSENQ 304
            IDD    W W E Q
Sbjct: 263  IDDQSGLWSWLEQQ 276


>ref|NP_001242266.1| uncharacterized protein LOC100808033 [Glycine max]
            gi|255647094|gb|ACU24015.1| unknown [Glycine max]
          Length = 295

 Score =  323 bits (829), Expect = 3e-86
 Identities = 171/259 (66%), Positives = 194/259 (74%), Gaps = 12/259 (4%)
 Frame = -3

Query: 1044 SLNPILPLCTSQDFHGVASLLGKRSMSFS-GIE------NVDEDLSDDGSQAGEKKRRLS 886
            SL  ILP C  Q++HG  ++LGKRSMSFS GIE      N +EDLSDDGSQAGEKKRRL+
Sbjct: 34   SLTSILPTCAPQEYHGGVTILGKRSMSFSSGIEHGEEANNAEEDLSDDGSQAGEKKRRLN 93

Query: 885  MEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDILK 706
            MEQVKTLEK+FELGNKLEPERKMQLARALGLQPRQ+AIWFQNRRARWKTKQLEKDYD+LK
Sbjct: 94   MEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLK 153

Query: 705  RQFDAIKADNDTLQAQNKKLQSRILALKGREPTESINLNKETEGXXXXXXXXXXXXXXXX 526
            RQ++A+K+DND LQAQN+KLQ+ ILALK REPTESINLNKETEG                
Sbjct: 154  RQYEAVKSDNDALQAQNQKLQAEILALKSREPTESINLNKETEGSCSNRSENSSDIKLDI 213

Query: 525  XRTPATDSP---LSSNPGRPLFPT-SLRPTSVIQLLQNSSRMD-AHCQKIQNQIQEESIC 361
             RTPA DSP       P RP FP  S+RP  V+QL Q SSR + A CQKI   ++EES+ 
Sbjct: 214  SRTPAIDSPHFTHQQQPSRPFFPPFSVRPAGVVQLFQTSSRPELASCQKIDQMVKEESLS 273

Query: 360  NIFNAIDDHPSFWPWSENQ 304
            N+F  +DD   FWPW E Q
Sbjct: 274  NMFCGMDDQSGFWPWLEQQ 292


Top