BLASTX nr result

ID: Coptis23_contig00000135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000135
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB70736.1| putative MADS-domain transcription factor MpMADS...   148   5e-34
ref|XP_004143442.1| PREDICTED: MADS-box protein SVP-like [Cucumi...   147   1e-33
gb|ACV74250.1| EXTRAPETALS [Petunia x hybrida] gi|267850663|gb|A...   147   1e-33
gb|AAW66885.1| MADS box transcription factor [Elaeis guineensis]      145   3e-33
gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL...   145   3e-33

>dbj|BAB70736.1| putative MADS-domain transcription factor MpMADS1 [Magnolia
           praecocissima]
          Length = 229

 Score =  148 bits (373), Expect = 5e-34
 Identities = 85/118 (72%), Positives = 88/118 (74%), Gaps = 1/118 (0%)
 Frame = -1

Query: 352 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVXXXXXXXXXXXXXXXXX 173
           M R KIQIKKI N TARQVTFSKRRRGLFKKAEELSILCDA+V                 
Sbjct: 1   MARGKIQIKKIDNVTARQVTFSKRRRGLFKKAEELSILCDAEV----------------- 43

Query: 172 XXXDADVALIIFSATGKLFEFSSSSMKEIIERHNLHSKNLQKLD-QPSLELQLENSNY 2
                  ALIIFSATGKLFE+SSSSMKEIIERH +HSKNLQKLD QPSLELQLENSNY
Sbjct: 44  -------ALIIFSATGKLFEYSSSSMKEIIERHTMHSKNLQKLDQQPSLELQLENSNY 94


>ref|XP_004143442.1| PREDICTED: MADS-box protein SVP-like [Cucumis sativus]
          Length = 228

 Score =  147 bits (370), Expect = 1e-33
 Identities = 83/118 (70%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
 Frame = -1

Query: 352 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVXXXXXXXXXXXXXXXXX 173
           M +EKIQI+KI N TARQVTFSKRRRGLFKKA+ELS+LCDADV                 
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADV----------------- 43

Query: 172 XXXDADVALIIFSATGKLFEFSSSSMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNY 2
                  ALIIFSATGKLFE+SSSSMK IIERHNLHSKNLQKL+QPSLELQL ENSNY
Sbjct: 44  -------ALIIFSATGKLFEYSSSSMKGIIERHNLHSKNLQKLEQPSLELQLVENSNY 94


>gb|ACV74250.1| EXTRAPETALS [Petunia x hybrida] gi|267850663|gb|ACY82403.1|
           MADS-box protein 20 [Petunia x hybrida]
          Length = 233

 Score =  147 bits (370), Expect = 1e-33
 Identities = 83/118 (70%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
 Frame = -1

Query: 352 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVXXXXXXXXXXXXXXXXX 173
           M REKIQIKKI N TARQVTFSKRRRGLFKKAEELS+LCDADV                 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADV----------------- 43

Query: 172 XXXDADVALIIFSATGKLFEFSSSSMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNY 2
                  ALIIFS+TGKLFE+SSSSMKEI+ER +LHSKNL+KLDQPSLELQL ENSNY
Sbjct: 44  -------ALIIFSSTGKLFEYSSSSMKEILERRDLHSKNLEKLDQPSLELQLVENSNY 94


>gb|AAW66885.1| MADS box transcription factor [Elaeis guineensis]
          Length = 225

 Score =  145 bits (367), Expect = 3e-33
 Identities = 79/117 (67%), Positives = 88/117 (75%)
 Frame = -1

Query: 352 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVXXXXXXXXXXXXXXXXX 173
           M REKIQI+KI N TARQVTFSKRRRGLFKKAEEL+ILCDADV                 
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELAILCDADV----------------- 43

Query: 172 XXXDADVALIIFSATGKLFEFSSSSMKEIIERHNLHSKNLQKLDQPSLELQLENSNY 2
                  ALIIFS+TGKLFEFSSSSMKEI+E+H+LHSKNLQK++ PSL+L LENSNY
Sbjct: 44  -------ALIIFSSTGKLFEFSSSSMKEILEKHSLHSKNLQKVEPPSLDLNLENSNY 93


>gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL36738.1| MADS
           domain class transcription factor [Malus x domestica]
          Length = 224

 Score =  145 bits (366), Expect = 3e-33
 Identities = 80/118 (67%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
 Frame = -1

Query: 352 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVXXXXXXXXXXXXXXXXX 173
           M REKIQIKKI N TARQVTFSKRRRGL KKAEELS+LCDAD+                 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLLKKAEELSVLCDADI----------------- 43

Query: 172 XXXDADVALIIFSATGKLFEFSSSSMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNY 2
                  ALIIFS+TGKLFE++SSSMKEI+ERHNLHSKNL+KL+QPSL+LQL ENSNY
Sbjct: 44  -------ALIIFSSTGKLFEYASSSMKEILERHNLHSKNLEKLEQPSLQLQLVENSNY 94


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