BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000123
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]         331   1e-88
ref|XP_002527284.1| Photosystem I reaction center subunit XI, ch...   325   1e-86
ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|2...   319   7e-85
ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Popu...   318   2e-84
ref|XP_004152826.1| PREDICTED: photosystem I reaction center sub...   310   4e-82

>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
          Length = 220

 Score =  331 bits (849), Expect = 1e-88
 Identities = 166/217 (76%), Positives = 182/217 (83%), Gaps = 2/217 (0%)
 Frame = -3

Query: 768 AASPIASQLKSNFASSITRG--LVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVV 595
           AASP+ASQLKS FASS+TRG  LV+PKGISG+PFK+ PS R+SCF +KA+Q DKPTYQV+
Sbjct: 4   AASPMASQLKSKFASSLTRGSGLVTPKGISGSPFKIFPSTRKSCFTIKAVQTDKPTYQVI 63

Query: 594 QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKT 415
           QP+NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAVNPLLRGVEVGLAHGFLLVGPFVK 
Sbjct: 64  QPLNGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKA 123

Query: 414 GPLRNTEYXXXXXXXXXXXXXXXLSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQ 235
           GPLRNTEY               LS+CLTIYGI+SF EGE STAPALTLTGRKK PDQLQ
Sbjct: 124 GPLRNTEYAGGAGSLAAAGLVVILSMCLTIYGISSFKEGEASTAPALTLTGRKKVPDQLQ 183

Query: 234 TADGWAKXXXXXXXXGISGVTWAFFLLYVLNLPYYVK 124
           TA+GW+K        GISGVTWA+FLLYVL+LPYYVK
Sbjct: 184 TAEGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYYVK 220


>ref|XP_002527284.1| Photosystem I reaction center subunit XI, chloroplast precursor,
           putative [Ricinus communis] gi|223533377|gb|EEF35128.1|
           Photosystem I reaction center subunit XI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 218

 Score =  325 bits (833), Expect = 1e-86
 Identities = 161/214 (75%), Positives = 181/214 (84%)
 Frame = -3

Query: 765 ASPIASQLKSNFASSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQPI 586
           ASP+ASQLKS+FASS+TRGL  P+GISG PF+V P++R + F VKAIQ++KPT+QV+QPI
Sbjct: 5   ASPMASQLKSSFASSVTRGLGVPRGISGNPFRVSPAKRATSFTVKAIQSEKPTFQVIQPI 64

Query: 585 NGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKTGPL 406
           NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFLLVGPFVK GPL
Sbjct: 65  NGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPL 124

Query: 405 RNTEYXXXXXXXXXXXXXXXLSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTAD 226
           RNTE+               LSICLT+YG+ASFNEGEPSTAP+LTLTGRKKEPDQLQTAD
Sbjct: 125 RNTEFAGAAGSLAAGGLVAILSICLTMYGVASFNEGEPSTAPSLTLTGRKKEPDQLQTAD 184

Query: 225 GWAKXXXXXXXXGISGVTWAFFLLYVLNLPYYVK 124
           GWAK        GISGV WA+FLLYVLNLPY+VK
Sbjct: 185 GWAKFTGGFFFGGISGVIWAYFLLYVLNLPYFVK 218


>ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|222844750|gb|EEE82297.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  319 bits (817), Expect = 7e-85
 Identities = 162/215 (75%), Positives = 177/215 (82%)
 Frame = -3

Query: 768 AASPIASQLKSNFASSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQP 589
           AASP+ASQLKS+FASS+ R LV P  ISGAPF+V PS+R   F VKAIQ++KPTYQVVQP
Sbjct: 4   AASPMASQLKSSFASSLARRLVIPTAISGAPFRVSPSKRS--FTVKAIQSEKPTYQVVQP 61

Query: 588 INGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKTGP 409
           INGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFLLVGPFVK GP
Sbjct: 62  INGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGP 121

Query: 408 LRNTEYXXXXXXXXXXXXXXXLSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTA 229
           LRNTEY               LSICLT+YG+ASF EGEPSTAP LTLTGRKKEPDQLQT+
Sbjct: 122 LRNTEYAGAAGSLAAGGLVAILSICLTMYGVASFTEGEPSTAPGLTLTGRKKEPDQLQTS 181

Query: 228 DGWAKXXXXXXXXGISGVTWAFFLLYVLNLPYYVK 124
           DGWAK        GISGV WA+FLLYV+NLPYYVK
Sbjct: 182 DGWAKFSGGFFFGGISGVIWAYFLLYVINLPYYVK 216


>ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Populus trichocarpa]
           gi|118487151|gb|ABK95404.1| unknown [Populus
           trichocarpa] gi|118488447|gb|ABK96038.1| unknown
           [Populus trichocarpa] gi|222861335|gb|EEE98877.1|
           hypothetical protein POPTRDRAFT_732598 [Populus
           trichocarpa]
          Length = 216

 Score =  318 bits (814), Expect = 2e-84
 Identities = 163/214 (76%), Positives = 176/214 (82%)
 Frame = -3

Query: 765 ASPIASQLKSNFASSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQPI 586
           ASP+ASQLKS+ ASS+ R LV P+GISGAPF+V P++R   F VKA+QADKPTYQVVQPI
Sbjct: 5   ASPMASQLKSSLASSLGRRLVIPRGISGAPFRVSPNKRS--FTVKAVQADKPTYQVVQPI 62

Query: 585 NGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKTGPL 406
           NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFLLVGPFVK GPL
Sbjct: 63  NGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPL 122

Query: 405 RNTEYXXXXXXXXXXXXXXXLSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTAD 226
           RNTEY               LSICLT+YG ASF EGEPS AP+LTLTGRKK PDQLQTAD
Sbjct: 123 RNTEYAGAAGSLAAGGLIVILSICLTMYGAASFTEGEPSIAPSLTLTGRKKVPDQLQTAD 182

Query: 225 GWAKXXXXXXXXGISGVTWAFFLLYVLNLPYYVK 124
           GWAK        GISGVTWAFFLLYV+NLPYYVK
Sbjct: 183 GWAKFTGGFFFGGISGVTWAFFLLYVINLPYYVK 216


>ref|XP_004152826.1| PREDICTED: photosystem I reaction center subunit XI,
           chloroplastic-like [Cucumis sativus]
           gi|1181599|dbj|BAA11677.1| subunit of photosystem I
           [Cucumis sativus]
          Length = 217

 Score =  310 bits (793), Expect = 4e-82
 Identities = 155/215 (72%), Positives = 174/215 (80%)
 Frame = -3

Query: 768 AASPIASQLKSNFASSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQP 589
           A SPIASQL S+FASS TR L+SPKG+S +P + +P+R  S F ++AIQADKPT+QV+QP
Sbjct: 4   ATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHS-FTIRAIQADKPTFQVIQP 62

Query: 588 INGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKTGP 409
           INGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGF LVGPFVK GP
Sbjct: 63  INGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGP 122

Query: 408 LRNTEYXXXXXXXXXXXXXXXLSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTA 229
           LRNT Y               LS+CLT+YG+ASFNEGEPSTAP+LTLTGRKK PD LQTA
Sbjct: 123 LRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTA 182

Query: 228 DGWAKXXXXXXXXGISGVTWAFFLLYVLNLPYYVK 124
           DGWAK        GISGV WA+FLLYVL+LPYYVK
Sbjct: 183 DGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217