BLASTX nr result

ID: Coptis23_contig00000118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000118
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299361.1| GH3 family protein [Populus trichocarpa] gi|...   352   5e-95
ref|XP_002303740.1| GH3 family protein [Populus trichocarpa] gi|...   344   8e-93
ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthe...   342   3e-92
ref|XP_002512687.1| Indole-3-acetic acid-amido synthetase GH3.17...   338   4e-91
emb|CBI29278.3| unnamed protein product [Vitis vinifera]              331   7e-89

>ref|XP_002299361.1| GH3 family protein [Populus trichocarpa] gi|222846619|gb|EEE84166.1|
            GH3 family protein [Populus trichocarpa]
          Length = 606

 Score =  352 bits (902), Expect = 5e-95
 Identities = 169/211 (80%), Positives = 186/211 (88%)
 Frame = -2

Query: 633  AVYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 454
            AV L  VK GHYYEL+VTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK
Sbjct: 392  AVDLVDVKLGHYYELIVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 451

Query: 453  TNENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTT 274
            TNE DLL AVTQAK+LLE L  +LTEYTS+ DT+SIPGHYVLFWELKMRG  +L EL+  
Sbjct: 452  TNEEDLLKAVTQAKVLLEPLGFLLTEYTSFADTASIPGHYVLFWELKMRGTNDLPELDPV 511

Query: 273  VMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTP 94
            +ME+CC+IVEESLD VYRRCR KDKSIGPLE+RVV HGTFDALMDFCVSQGSSVNQYKTP
Sbjct: 512  IMEQCCSIVEESLDSVYRRCRKKDKSIGPLEVRVVTHGTFDALMDFCVSQGSSVNQYKTP 571

Query: 93   RCIKDSEAIEILNARVVGRFFSRKAPLWKQY 1
            RCIK  EA++IL++RVVGRF S K P W+ +
Sbjct: 572  RCIKSEEALKILDSRVVGRFSSNKTPFWEPF 602


>ref|XP_002303740.1| GH3 family protein [Populus trichocarpa] gi|222841172|gb|EEE78719.1|
            GH3 family protein [Populus trichocarpa]
          Length = 587

 Score =  344 bits (883), Expect = 8e-93
 Identities = 168/209 (80%), Positives = 182/209 (87%)
 Frame = -2

Query: 633  AVYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 454
            AV L  VK GHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK
Sbjct: 379  AVDLEDVKLGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 438

Query: 453  TNENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTT 274
            TNE DLL AVTQAK+LLE L  +LTEYTS+ DTSSIPGHYVLFWELK +G  +L EL+  
Sbjct: 439  TNEEDLLKAVTQAKVLLEPLGFLLTEYTSFADTSSIPGHYVLFWELKTQGTNDLPELDPI 498

Query: 273  VMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTP 94
             ME+CC+ VEESLD +YRRCR KDKSIGPLEIRVV HGTFDALMDFCVSQGSSVNQYKT 
Sbjct: 499  TMEKCCSTVEESLDSIYRRCRKKDKSIGPLEIRVVTHGTFDALMDFCVSQGSSVNQYKTT 558

Query: 93   RCIKDSEAIEILNARVVGRFFSRKAPLWK 7
            RCIK  EA +IL++RVVGRFFS+K P W+
Sbjct: 559  RCIKSEEAFKILHSRVVGRFFSKKTPFWE 587


>ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like [Vitis
            vinifera]
          Length = 607

 Score =  342 bits (878), Expect = 3e-92
 Identities = 167/210 (79%), Positives = 182/210 (86%)
 Frame = -2

Query: 630  VYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 451
            V L  VK GHYYELVVTTFTGLYRYR GDILMVTGFYNNAPQFRFV RRNVVLSIDTDKT
Sbjct: 393  VGLVDVKVGHYYELVVTTFTGLYRYRTGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKT 452

Query: 450  NENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTTV 271
            NE DLL AVTQAKLLLE    +LTEYTSY DTSSIPGHYVLFWELK RGN +LSE + T+
Sbjct: 453  NEEDLLKAVTQAKLLLEPYGFLLTEYTSYADTSSIPGHYVLFWELKTRGNNDLSEPDHTI 512

Query: 270  MEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTPR 91
            ME+CC+ VEESLD VYRRCR +D SIGPLEIR+VK GTFDALMDFCVSQGSSVNQYKTPR
Sbjct: 513  MEQCCSTVEESLDSVYRRCRRRDNSIGPLEIRIVKPGTFDALMDFCVSQGSSVNQYKTPR 572

Query: 90   CIKDSEAIEILNARVVGRFFSRKAPLWKQY 1
            CIK  EAI+IL++RVVG+ FS+K P W+ +
Sbjct: 573  CIKSKEAIKILDSRVVGKVFSKKVPFWEPF 602


>ref|XP_002512687.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus
            communis] gi|223548648|gb|EEF50139.1| Indole-3-acetic
            acid-amido synthetase GH3.17, putative [Ricinus communis]
          Length = 590

 Score =  338 bits (868), Expect = 4e-91
 Identities = 164/210 (78%), Positives = 181/210 (86%)
 Frame = -2

Query: 630  VYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 451
            V L  VK GHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT
Sbjct: 378  VDLVDVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 437

Query: 450  NENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTTV 271
            NE DLL AVTQAK LLE L  ++TEYTS+ DTSSIPGHYVLFWELK RG     EL+  +
Sbjct: 438  NEEDLLKAVTQAKRLLEPLGFLMTEYTSFADTSSIPGHYVLFWELKTRGENVPEELDPII 497

Query: 270  MEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTPR 91
            ME+CC  VEESLD VYRRCR KDKSIG LEIRVVKHGTFDALMDFC+SQGSSVNQYKTPR
Sbjct: 498  MEQCCLTVEESLDSVYRRCRKKDKSIGALEIRVVKHGTFDALMDFCLSQGSSVNQYKTPR 557

Query: 90   CIKDSEAIEILNARVVGRFFSRKAPLWKQY 1
            CIK   A++IL++RV+G+FFS++AP W+ +
Sbjct: 558  CIKSEAALKILDSRVIGKFFSKRAPFWEPF 587


>emb|CBI29278.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  331 bits (849), Expect = 7e-89
 Identities = 164/210 (78%), Positives = 179/210 (85%)
 Frame = -2

Query: 630 VYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 451
           V L  VK GHYYELVVTTFTG   YR GDILMVTGFYNNAPQFRFV RRNVVLSIDTDKT
Sbjct: 283 VGLVDVKVGHYYELVVTTFTG--EYRTGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKT 340

Query: 450 NENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTTV 271
           NE DLL AVTQAKLLLE    +LTEYTSY DTSSIPGHYVLFWELK RGN +LSE + T+
Sbjct: 341 NEEDLLKAVTQAKLLLEPYGFLLTEYTSYADTSSIPGHYVLFWELKTRGNNDLSEPDHTI 400

Query: 270 MEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTPR 91
           ME+CC+ VEESLD VYRRCR +D SIGPLEIR+VK GTFDALMDFCVSQGSSVNQYKTPR
Sbjct: 401 MEQCCSTVEESLDSVYRRCRRRDNSIGPLEIRIVKPGTFDALMDFCVSQGSSVNQYKTPR 460

Query: 90  CIKDSEAIEILNARVVGRFFSRKAPLWKQY 1
           CIK  EAI+IL++RVVG+ FS+K P W+ +
Sbjct: 461 CIKSKEAIKILDSRVVGKVFSKKVPFWEPF 490


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