BLASTX nr result
ID: Coptis23_contig00000118
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00000118 (679 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299361.1| GH3 family protein [Populus trichocarpa] gi|... 352 5e-95 ref|XP_002303740.1| GH3 family protein [Populus trichocarpa] gi|... 344 8e-93 ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthe... 342 3e-92 ref|XP_002512687.1| Indole-3-acetic acid-amido synthetase GH3.17... 338 4e-91 emb|CBI29278.3| unnamed protein product [Vitis vinifera] 331 7e-89 >ref|XP_002299361.1| GH3 family protein [Populus trichocarpa] gi|222846619|gb|EEE84166.1| GH3 family protein [Populus trichocarpa] Length = 606 Score = 352 bits (902), Expect = 5e-95 Identities = 169/211 (80%), Positives = 186/211 (88%) Frame = -2 Query: 633 AVYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 454 AV L VK GHYYEL+VTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK Sbjct: 392 AVDLVDVKLGHYYELIVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 451 Query: 453 TNENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTT 274 TNE DLL AVTQAK+LLE L +LTEYTS+ DT+SIPGHYVLFWELKMRG +L EL+ Sbjct: 452 TNEEDLLKAVTQAKVLLEPLGFLLTEYTSFADTASIPGHYVLFWELKMRGTNDLPELDPV 511 Query: 273 VMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTP 94 +ME+CC+IVEESLD VYRRCR KDKSIGPLE+RVV HGTFDALMDFCVSQGSSVNQYKTP Sbjct: 512 IMEQCCSIVEESLDSVYRRCRKKDKSIGPLEVRVVTHGTFDALMDFCVSQGSSVNQYKTP 571 Query: 93 RCIKDSEAIEILNARVVGRFFSRKAPLWKQY 1 RCIK EA++IL++RVVGRF S K P W+ + Sbjct: 572 RCIKSEEALKILDSRVVGRFSSNKTPFWEPF 602 >ref|XP_002303740.1| GH3 family protein [Populus trichocarpa] gi|222841172|gb|EEE78719.1| GH3 family protein [Populus trichocarpa] Length = 587 Score = 344 bits (883), Expect = 8e-93 Identities = 168/209 (80%), Positives = 182/209 (87%) Frame = -2 Query: 633 AVYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 454 AV L VK GHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK Sbjct: 379 AVDLEDVKLGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDK 438 Query: 453 TNENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTT 274 TNE DLL AVTQAK+LLE L +LTEYTS+ DTSSIPGHYVLFWELK +G +L EL+ Sbjct: 439 TNEEDLLKAVTQAKVLLEPLGFLLTEYTSFADTSSIPGHYVLFWELKTQGTNDLPELDPI 498 Query: 273 VMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTP 94 ME+CC+ VEESLD +YRRCR KDKSIGPLEIRVV HGTFDALMDFCVSQGSSVNQYKT Sbjct: 499 TMEKCCSTVEESLDSIYRRCRKKDKSIGPLEIRVVTHGTFDALMDFCVSQGSSVNQYKTT 558 Query: 93 RCIKDSEAIEILNARVVGRFFSRKAPLWK 7 RCIK EA +IL++RVVGRFFS+K P W+ Sbjct: 559 RCIKSEEAFKILHSRVVGRFFSKKTPFWE 587 >ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like [Vitis vinifera] Length = 607 Score = 342 bits (878), Expect = 3e-92 Identities = 167/210 (79%), Positives = 182/210 (86%) Frame = -2 Query: 630 VYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 451 V L VK GHYYELVVTTFTGLYRYR GDILMVTGFYNNAPQFRFV RRNVVLSIDTDKT Sbjct: 393 VGLVDVKVGHYYELVVTTFTGLYRYRTGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKT 452 Query: 450 NENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTTV 271 NE DLL AVTQAKLLLE +LTEYTSY DTSSIPGHYVLFWELK RGN +LSE + T+ Sbjct: 453 NEEDLLKAVTQAKLLLEPYGFLLTEYTSYADTSSIPGHYVLFWELKTRGNNDLSEPDHTI 512 Query: 270 MEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTPR 91 ME+CC+ VEESLD VYRRCR +D SIGPLEIR+VK GTFDALMDFCVSQGSSVNQYKTPR Sbjct: 513 MEQCCSTVEESLDSVYRRCRRRDNSIGPLEIRIVKPGTFDALMDFCVSQGSSVNQYKTPR 572 Query: 90 CIKDSEAIEILNARVVGRFFSRKAPLWKQY 1 CIK EAI+IL++RVVG+ FS+K P W+ + Sbjct: 573 CIKSKEAIKILDSRVVGKVFSKKVPFWEPF 602 >ref|XP_002512687.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus communis] gi|223548648|gb|EEF50139.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus communis] Length = 590 Score = 338 bits (868), Expect = 4e-91 Identities = 164/210 (78%), Positives = 181/210 (86%) Frame = -2 Query: 630 VYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 451 V L VK GHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT Sbjct: 378 VDLVDVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 437 Query: 450 NENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTTV 271 NE DLL AVTQAK LLE L ++TEYTS+ DTSSIPGHYVLFWELK RG EL+ + Sbjct: 438 NEEDLLKAVTQAKRLLEPLGFLMTEYTSFADTSSIPGHYVLFWELKTRGENVPEELDPII 497 Query: 270 MEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTPR 91 ME+CC VEESLD VYRRCR KDKSIG LEIRVVKHGTFDALMDFC+SQGSSVNQYKTPR Sbjct: 498 MEQCCLTVEESLDSVYRRCRKKDKSIGALEIRVVKHGTFDALMDFCLSQGSSVNQYKTPR 557 Query: 90 CIKDSEAIEILNARVVGRFFSRKAPLWKQY 1 CIK A++IL++RV+G+FFS++AP W+ + Sbjct: 558 CIKSEAALKILDSRVIGKFFSKRAPFWEPF 587 >emb|CBI29278.3| unnamed protein product [Vitis vinifera] Length = 495 Score = 331 bits (849), Expect = 7e-89 Identities = 164/210 (78%), Positives = 179/210 (85%) Frame = -2 Query: 630 VYLTTVKCGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKT 451 V L VK GHYYELVVTTFTG YR GDILMVTGFYNNAPQFRFV RRNVVLSIDTDKT Sbjct: 283 VGLVDVKVGHYYELVVTTFTG--EYRTGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKT 340 Query: 450 NENDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSELNTTV 271 NE DLL AVTQAKLLLE +LTEYTSY DTSSIPGHYVLFWELK RGN +LSE + T+ Sbjct: 341 NEEDLLKAVTQAKLLLEPYGFLLTEYTSYADTSSIPGHYVLFWELKTRGNNDLSEPDHTI 400 Query: 270 MEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTPR 91 ME+CC+ VEESLD VYRRCR +D SIGPLEIR+VK GTFDALMDFCVSQGSSVNQYKTPR Sbjct: 401 MEQCCSTVEESLDSVYRRCRRRDNSIGPLEIRIVKPGTFDALMDFCVSQGSSVNQYKTPR 460 Query: 90 CIKDSEAIEILNARVVGRFFSRKAPLWKQY 1 CIK EAI+IL++RVVG+ FS+K P W+ + Sbjct: 461 CIKSKEAIKILDSRVVGKVFSKKVPFWEPF 490