BLASTX nr result

ID: Coptis23_contig00000115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000115
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310032.1| predicted protein [Populus trichocarpa] gi|2...   226   3e-80
ref|XP_002529228.1| conserved hypothetical protein [Ricinus comm...   229   7e-76
ref|XP_002275977.1| PREDICTED: programmed cell death protein 2-l...   191   4e-63
ref|XP_002974567.1| hypothetical protein SELMODRAFT_442525 [Sela...   163   2e-57
ref|XP_002963265.1| hypothetical protein SELMODRAFT_405017 [Sela...   166   3e-56

>ref|XP_002310032.1| predicted protein [Populus trichocarpa] gi|222852935|gb|EEE90482.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  226 bits (576), Expect(2) = 3e-80
 Identities = 127/289 (43%), Positives = 167/289 (57%), Gaps = 1/289 (0%)
 Frame = -1

Query: 939 PLSWRALRVQKXXXXXXXXXXXXXXXSGRTSAPISNNKWLEDIWSXXXXXXXXXXXXDME 760
           PLSWRALRVQK                      +S   WL D               D+E
Sbjct: 93  PLSWRALRVQKVDSERESSVSTEEVVPSTPPVSVSKTNWLGD---------DSDEDIDLE 143

Query: 759 KLSRALSEASHIASLTKKQNSRQQPESVKTASLLHPIVQLTDLKTPVVPCFYIYPQDESL 580
            LS+ALSEA  +AS +KK++  ++ ESV   S L     + D++TPVVPCFY+Y Q+ S 
Sbjct: 144 ALSKALSEAGTLASHSKKKDGNRRSESVVKNSTLVARTGV-DMETPVVPCFYMYTQEPSS 202

Query: 579 SGKFSVVCSNISSLSIKENE-GDTDDQRXXXXXXXXXXEYDRALFVDRTYMKFKKRLDAY 403
               S +CS  S LS+KE +  + +D            EYD+AL  DRTY+KFKK+LDA 
Sbjct: 203 KDIVSSICSTYSELSVKEEQICNYNDDEMGDAGEQEVYEYDKALSADRTYLKFKKQLDAN 262

Query: 402 PEQCFRYYYGGKPLLATKESDVPAKCRHCGASRHYEMQLMPPLLFFLREASDGLSTLSPE 223
           P+QC R+ YGGKPLLAT E   P  C+ CG  RH+EMQLMP L+ FL + +D       E
Sbjct: 263 PDQCSRHLYGGKPLLATAELGDPGNCKLCGGFRHFEMQLMPQLISFLLDGADDCQKNVLE 322

Query: 222 HWEWMTLFVYTCSKNCSYTTSQDASSSNDWTVAEETVILQFE*LLHGQI 76
           +W WMTL +YTCSK+CS +  ++ S+++ WTVAEE V++QFE  LH  I
Sbjct: 323 NWNWMTLVIYTCSKSCSNSFDREKSTTSGWTVAEEAVLVQFEKALHESI 371



 Score =  100 bits (249), Expect(2) = 3e-80
 Identities = 43/65 (66%), Positives = 52/65 (80%)
 Frame = -3

Query: 1249 GEVILGMPGPWAKDYREAADHYTTKIGGLPDWPIPEVDVRPDFLECGACGSRLCLVVQLY 1070
            G V+LGMPGPWA D RE +D YT+KIGGLPDWP P  ++ P+ L CGACGS+LCLV Q+Y
Sbjct: 5    GGVLLGMPGPWADDNREPSDLYTSKIGGLPDWPFPAENLAPNLLICGACGSKLCLVAQVY 64

Query: 1069 APVFS 1055
            AP+ S
Sbjct: 65   APISS 69


>ref|XP_002529228.1| conserved hypothetical protein [Ricinus communis]
           gi|223531301|gb|EEF33141.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  229 bits (584), Expect(2) = 7e-76
 Identities = 121/290 (41%), Positives = 167/290 (57%), Gaps = 1/290 (0%)
 Frame = -1

Query: 942 NPLSWRALRVQKXXXXXXXXXXXXXXXS-GRTSAPISNNKWLEDIWSXXXXXXXXXXXXD 766
           N +SWRALR+Q+               +   T   +S   WLE +              D
Sbjct: 90  NAVSWRALRLQRLDDERKPSTSFEEAVAVSTTPVSVSKTNWLECL-----DDDESDKDLD 144

Query: 765 MEKLSRALSEASHIASLTKKQNSRQQPESVKTASLLHPIVQLTDLKTPVVPCFYIYPQDE 586
           ++ L +ALSEA  +AS +KK     Q ES+  +  +    ++ D+ +PVVPCFYIY Q E
Sbjct: 145 LDALGKALSEAGSLASHSKKPQKTDQYESLVNSPPMITRTRMVDMDSPVVPCFYIYTQKE 204

Query: 585 SLSGKFSVVCSNISSLSIKENEGDTDDQRXXXXXXXXXXEYDRALFVDRTYMKFKKRLDA 406
             SG  + +CSN S+LSIK+ +    DQ           EYD+AL  DRTY+KFKK+LDA
Sbjct: 205 PPSGNVTSICSNYSTLSIKDKQSGDGDQEQEEVWGEEAYEYDKALTADRTYLKFKKKLDA 264

Query: 405 YPEQCFRYYYGGKPLLATKESDVPAKCRHCGASRHYEMQLMPPLLFFLREASDGLSTLSP 226
            PEQCFRY +GG+PLLA  E + P  C+ CG  RHYEMQLMPPL++FL++ +      + 
Sbjct: 265 NPEQCFRYLFGGRPLLAKPEVEDPGTCKLCGGPRHYEMQLMPPLIYFLQDVAADSQKHAL 324

Query: 225 EHWEWMTLFVYTCSKNCSYTTSQDASSSNDWTVAEETVILQFE*LLHGQI 76
           E+W WMTL V+TCSK+CS  ++Q  + +  W V EE V++Q E  LH  +
Sbjct: 325 ENWNWMTLIVFTCSKSCSNPSNQAKNETGGWIVVEEAVVVQLETPLHESV 374



 Score = 82.8 bits (203), Expect(2) = 7e-76
 Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -3

Query: 1252 MGEVILGMPGPWAKDYREAADHYTTKIGGLPDWPIPEVDVRP-DFLECGACGSRLCLVVQ 1076
            M  ++LGMPG WA D RE +D YT+KIGGLPDWP  +  + P + L C  CG++LCLV Q
Sbjct: 1    MSRLVLGMPGAWADDNREPSDCYTSKIGGLPDWPFSQESLTPSNLLNCSVCGAKLCLVAQ 60

Query: 1075 LYAPVFS 1055
            + AP+ S
Sbjct: 61   VCAPISS 67


>ref|XP_002275977.1| PREDICTED: programmed cell death protein 2-like [Vitis vinifera]
          Length = 382

 Score =  191 bits (485), Expect(2) = 4e-63
 Identities = 112/289 (38%), Positives = 156/289 (53%), Gaps = 7/289 (2%)
 Frame = -1

Query: 942 NPLSWRALRVQKXXXXXXXXXXXXXXXSGRTSAPISNNKWLEDIWSXXXXXXXXXXXXDM 763
           NP SWRA+RVQK                   S+P++   W  DIW+             +
Sbjct: 106 NPCSWRAIRVQKLNPTDEEVVQETAV----ASSPVAG--WNNDIWTEEGNDENDEDID-L 158

Query: 762 EKLSRALSEASHIASLTKKQNSRQQPES-------VKTASLLHPIVQLTDLKTPVVPCFY 604
           E+L  AL EA+ +AS +KK++++   +S          +S L P  +L    TPV+PCFY
Sbjct: 159 EELGVALFEAASVASFSKKRHAKPTVKSSPLNTKPTVKSSPLSPGTRLVYNDTPVLPCFY 218

Query: 603 IYPQDESLSGKFSVVCSNISSLSIKENEGDTDDQRXXXXXXXXXXEYDRALFVDRTYMKF 424
            Y ++E            +SS  IK+      +Q           EY  A   DRTY +F
Sbjct: 219 TYTEEE------------LSSREIKK------EQTQKAVSNEEAYEYTGAWNADRTYFRF 260

Query: 423 KKRLDAYPEQCFRYYYGGKPLLATKESDVPAKCRHCGASRHYEMQLMPPLLFFLREASDG 244
           +K LDAYPEQCFRY  GGKPLLA +E + P +CRHCG S HYEMQL P LL+FL+E +D 
Sbjct: 261 RKCLDAYPEQCFRYSCGGKPLLAMEEVEDPGRCRHCGGSMHYEMQLTPALLYFLQERADD 320

Query: 243 LSTLSPEHWEWMTLFVYTCSKNCSYTTSQDASSSNDWTVAEETVILQFE 97
               S E+W W+T+ V+TCS++C + + Q+ S +  W VAEE + +Q+E
Sbjct: 321 RQKHSLEYWTWLTVIVFTCSQSCFHPSDQEKSDNEGWEVAEEFIFIQYE 369



 Score = 78.2 bits (191), Expect(2) = 4e-63
 Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 17/81 (20%)
 Frame = -3

Query: 1252 MGEVIL---GMPGPWAKDYREAADHYTTKIGGLP-------------DWPIPE-VDVRPD 1124
            MG+ +L   GMPGPWA++  E +DHYTTKIGGLP             DWPIP+ +  +P 
Sbjct: 1    MGDAVLELVGMPGPWAENDSEPSDHYTTKIGGLPNSIHIPAVDFRMQDWPIPQLLSSKPH 60

Query: 1123 FLECGACGSRLCLVVQLYAPV 1061
             L C  C   LCLV Q+YAP+
Sbjct: 61   LLRCAICEKDLCLVAQVYAPI 81


>ref|XP_002974567.1| hypothetical protein SELMODRAFT_442525 [Selaginella moellendorffii]
            gi|300157462|gb|EFJ24087.1| hypothetical protein
            SELMODRAFT_442525 [Selaginella moellendorffii]
          Length = 409

 Score =  163 bits (412), Expect(2) = 2e-57
 Identities = 108/311 (34%), Positives = 150/311 (48%), Gaps = 29/311 (9%)
 Frame = -1

Query: 942  NPLSWRALRVQKXXXXXXXXXXXXXXXSGRTSAP------------ISNNKWLED--IWS 805
            +PLSWR LR+QK               S  T                ++N W ED   W+
Sbjct: 104  SPLSWRTLRLQKDGPSSPVCSPASDTPSTSTGESGDDAEASSARDDQNSNDWWEDDSSWA 163

Query: 804  XXXXXXXXXXXXDM--EKLSRALSEASHIASLTKKQNS------RQQPESVKTASLLHPI 649
                         M   +L  AL EA + A+   +  +      R+  E   T+S     
Sbjct: 164  PIAQAENGEEAGSMGLHELEEALLEAGYAAAARPQSQASTRHEIRESNEDEPTSS----- 218

Query: 648  VQLTDLKTPVVPCFYIYPQDESLSGKFSVVCSNISSLSIKENEG-----DTDDQRXXXXX 484
             ++T+ + PV+PCFYIY Q+ES   + S   S + +     + G      TD        
Sbjct: 219  EEITEAELPVLPCFYIYSQNESHPCRGSRAVSALQNSERLVDFGLDASTGTDSAPADECW 278

Query: 483  XXXXXEYDRALFVDRTYMKFKKRLDAYPEQCFRYYYGGKPLLATKESDVPAKCRHCGASR 304
                 E+DR +  DRTY+KFKKRLD YPEQC+RY +GG+ LLA K+   P  C  C   R
Sbjct: 279  EGEEYEHDRTVSADRTYLKFKKRLDCYPEQCYRYSFGGRALLANKDQGDPGVCSLCRGPR 338

Query: 303  HYEMQLMPPLLFFLREASDGLSTLS--PEHWEWMTLFVYTCSKNCSYTTSQDASSSNDWT 130
             YEMQLMPPLL++L++A   L + S  P  WEW+T+ +YTC+++CS     D    + W 
Sbjct: 339  VYEMQLMPPLLYYLQQACKDLPSTSYGPNDWEWLTVIIYTCAQSCSRPPQADGERKS-WI 397

Query: 129  VAEETVILQFE 97
            V EE  ILQ+E
Sbjct: 398  VVEEATILQYE 408



 Score = 87.0 bits (214), Expect(2) = 2e-57
 Identities = 35/65 (53%), Positives = 47/65 (72%)
 Frame = -3

Query: 1255 EMGEVILGMPGPWAKDYREAADHYTTKIGGLPDWPIPEVDVRPDFLECGACGSRLCLVVQ 1076
            E   V+LGMPGPWA+D +E +DHYT+K+GGLPDWP+   ++    L+C  CG  L LV Q
Sbjct: 15   ENENVVLGMPGPWAEDNQEMSDHYTSKVGGLPDWPLDSDEIDSSLLKCSVCGGELGLVAQ 74

Query: 1075 LYAPV 1061
            +YAP+
Sbjct: 75   VYAPL 79


>ref|XP_002963265.1| hypothetical protein SELMODRAFT_405017 [Selaginella moellendorffii]
            gi|300168533|gb|EFJ35136.1| hypothetical protein
            SELMODRAFT_405017 [Selaginella moellendorffii]
          Length = 414

 Score =  166 bits (419), Expect(2) = 3e-56
 Identities = 109/311 (35%), Positives = 152/311 (48%), Gaps = 29/311 (9%)
 Frame = -1

Query: 942  NPLSWRALRVQKXXXXXXXXXXXXXXXSGRTSAP------------ISNNKWLED--IWS 805
            +PLSWR LR+QK               S  T                ++N W ED   W+
Sbjct: 109  SPLSWRTLRLQKDGPSSPVCSPASDTPSTSTGESGDDAEASSARDDQNSNDWWEDDSSWA 168

Query: 804  XXXXXXXXXXXXDM--EKLSRALSEASHIASLTKKQNS------RQQPESVKTASLLHPI 649
                         M   +L  AL EA + A+   +  +      R+  E   T+S     
Sbjct: 169  PIAQAENGEEAGSMGLHELEEALLEAGYAAAARPQSQASTRHEIRESNEDEPTSS----- 223

Query: 648  VQLTDLKTPVVPCFYIYPQDESLSGKFSVVCSNISSLSIKENEG-----DTDDQRXXXXX 484
             ++T+ + PV+PCFYIY Q+ES   + S   S + +     + G      TD  +     
Sbjct: 224  EEITEAELPVLPCFYIYSQNESHPCRGSRAVSALQNSERLVDFGLDASTGTDSAQADECW 283

Query: 483  XXXXXEYDRALFVDRTYMKFKKRLDAYPEQCFRYYYGGKPLLATKESDVPAKCRHCGASR 304
                 E+DRA+  DRTY+KFKKRLD YPEQC+RY +GG+ LLA K+   P  C  C   R
Sbjct: 284  EGEEYEHDRAVSADRTYLKFKKRLDCYPEQCYRYSFGGRALLANKDQGDPGVCSLCRGPR 343

Query: 303  HYEMQLMPPLLFFLREASDGLSTLS--PEHWEWMTLFVYTCSKNCSYTTSQDASSSNDWT 130
             YEMQLMPPLL++L++A   L + S  P  WEW+T+ +YTC+++CS     D    + W 
Sbjct: 344  VYEMQLMPPLLYYLQQACKDLPSTSYGPNDWEWLTVIIYTCAQSCSRPPQADGERKS-WI 402

Query: 129  VAEETVILQFE 97
            V EE  ILQ+E
Sbjct: 403  VVEEATILQYE 413



 Score = 80.9 bits (198), Expect(2) = 3e-56
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
 Frame = -3

Query: 1255 EMGEVILGMPGPWAKDYREAADHYTTKIGGLPDWPIPEVDVRPDFLECGACGSRLCLVV- 1079
            E   V+LGMPGPWA+D +E +DHYT+K+GGLPDWP+   ++    L+C  CG  L LV  
Sbjct: 15   ENENVVLGMPGPWAEDNQEMSDHYTSKVGGLPDWPLDSDEIDSSLLKCSVCGGELGLVAQ 74

Query: 1078 ----QLYAPV 1061
                Q+YAP+
Sbjct: 75   ASFFQVYAPL 84


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