BLASTX nr result
ID: Coptis23_contig00000110
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00000110 (913 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17463.3| unnamed protein product [Vitis vinifera] 389 e-106 dbj|BAM65771.1| Tm-1 protein [Solanum habrochaites] gi|410610518... 379 e-103 dbj|BAM48552.1| Tm-1 protein [Solanum habrochaites] gi|410610524... 379 e-103 dbj|BAM65813.1| Tm-1 protein [Solanum habrochaites] 376 e-102 dbj|BAM65811.1| Tm-1 protein [Solanum habrochaites] 376 e-102 >emb|CBI17463.3| unnamed protein product [Vitis vinifera] Length = 756 Score = 389 bits (998), Expect = e-106 Identities = 203/305 (66%), Positives = 234/305 (76%), Gaps = 4/305 (1%) Frame = +3 Query: 9 KVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEEKQP----DDRGEAIAIMXX 176 KVQVTVVDVS N E + GDF FV + ++LS +FG E+ P +DRG+A+ IM Sbjct: 45 KVQVTVVDVSTHQN--EIDSVGDFIFVPRKDILSCYFGSMEQTPGPLPEDRGKAVGIMSK 102 Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356 ED A K++PIG+PK+IVSTVASG TEPY+GT Sbjct: 103 ALEHYLKKAQEDHVLAGAIGIGGSGGTSIISSAFKSVPIGMPKIIVSTVASGQTEPYVGT 162 Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536 SDLILFPSVVD+CGIN+VSRVVLSNAGAA AGMVIGR+ R++ NEK TVG+TMFGV Sbjct: 163 SDLILFPSVVDVCGINNVSRVVLSNAGAAFAGMVIGRLQASRDSLSSNEKFTVGVTMFGV 222 Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716 TT CVN VKERL KEGYET+VFHATG GGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV Sbjct: 223 TTPCVNAVKERLVKEGYETLVFHATGTGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 282 Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896 MACDSSRFD++IEKK+PLV+SVGALDMVNFGAK TIPS +RNI++HNEQVSL+RTT D Sbjct: 283 MACDSSRFDAMIEKKIPLVVSVGALDMVNFGAKTTIPSHLLKRNIHVHNEQVSLVRTTVD 342 Query: 897 ENKKF 911 ENKKF Sbjct: 343 ENKKF 347 >dbj|BAM65771.1| Tm-1 protein [Solanum habrochaites] gi|410610518|dbj|BAM65772.1| Tm-1 protein [Solanum habrochaites] Length = 754 Score = 379 bits (972), Expect = e-103 Identities = 205/305 (67%), Positives = 229/305 (75%), Gaps = 3/305 (0%) Frame = +3 Query: 6 FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEE---KQPDDRGEAIAIMXX 176 FKV VTVVDVS S KETN DF FV ++LS + E + PDDRG+AIAIM Sbjct: 44 FKVGVTVVDVSTSR--KETNSCADFDFVPSKDVLSCYAQGGESVVQLPDDRGQAIAIMNK 101 Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356 +Q A ++LPIG+PKVI+STVASG TE YIGT Sbjct: 102 ALETFLSKANGEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161 Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536 SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+ +E + N K TVG+TMFGV Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221 Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716 TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281 Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896 MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGRKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341 Query: 897 ENKKF 911 ENKKF Sbjct: 342 ENKKF 346 >dbj|BAM48552.1| Tm-1 protein [Solanum habrochaites] gi|410610524|dbj|BAM65775.1| Tm-1 protein [Solanum habrochaites] gi|410610526|dbj|BAM65776.1| Tm-1 protein [Solanum habrochaites] Length = 754 Score = 379 bits (972), Expect = e-103 Identities = 205/305 (67%), Positives = 229/305 (75%), Gaps = 3/305 (0%) Frame = +3 Query: 6 FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEE---KQPDDRGEAIAIMXX 176 FKV VTVVDVS S KETN DF FV ++LS + E + PDDRG+AIAIM Sbjct: 44 FKVGVTVVDVSTSR--KETNSCADFDFVPSKDVLSCYAQGGESVVQLPDDRGQAIAIMNK 101 Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356 +Q A ++LPIG+PKVI+STVASG TE YIGT Sbjct: 102 ALETFLSKAYGEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161 Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536 SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+ +E + N K TVG+TMFGV Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221 Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716 TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281 Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896 MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGRKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341 Query: 897 ENKKF 911 ENKKF Sbjct: 342 ENKKF 346 >dbj|BAM65813.1| Tm-1 protein [Solanum habrochaites] Length = 754 Score = 376 bits (965), Expect = e-102 Identities = 205/305 (67%), Positives = 227/305 (74%), Gaps = 3/305 (0%) Frame = +3 Query: 6 FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEEKQ---PDDRGEAIAIMXX 176 FKV VTVVDVS S KETN DF FV ++LS H EE D RG AIAIM Sbjct: 44 FKVGVTVVDVSTSW--KETNSCADFDFVPSKDVLSCHTLGEETMGTFADTRGLAIAIMSK 101 Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356 ++Q A ++LPIG+PKVI+STVASG TE YIGT Sbjct: 102 ALETFLSIANDEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161 Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536 SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+ +E + N K TVG+TMFGV Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221 Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716 TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281 Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896 MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGPKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341 Query: 897 ENKKF 911 ENKKF Sbjct: 342 ENKKF 346 >dbj|BAM65811.1| Tm-1 protein [Solanum habrochaites] Length = 754 Score = 376 bits (965), Expect = e-102 Identities = 205/305 (67%), Positives = 227/305 (74%), Gaps = 3/305 (0%) Frame = +3 Query: 6 FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEEKQ---PDDRGEAIAIMXX 176 FKV VTVVDVS S KETN DF FV ++LS H EE D RG AIAIM Sbjct: 44 FKVGVTVVDVSTSW--KETNSCADFDFVPSKDVLSCHTLGEETMGTFADTRGLAIAIMSK 101 Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356 ++Q A ++LPIG+PKVI+STVASG TE YIGT Sbjct: 102 ALETFLSIANDEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161 Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536 SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+ +E + N K TVG+TMFGV Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221 Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716 TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281 Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896 MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGPKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341 Query: 897 ENKKF 911 ENKKF Sbjct: 342 ENKKF 346