BLASTX nr result

ID: Coptis23_contig00000110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000110
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17463.3| unnamed protein product [Vitis vinifera]              389   e-106
dbj|BAM65771.1| Tm-1 protein [Solanum habrochaites] gi|410610518...   379   e-103
dbj|BAM48552.1| Tm-1 protein [Solanum habrochaites] gi|410610524...   379   e-103
dbj|BAM65813.1| Tm-1 protein [Solanum habrochaites]                   376   e-102
dbj|BAM65811.1| Tm-1 protein [Solanum habrochaites]                   376   e-102

>emb|CBI17463.3| unnamed protein product [Vitis vinifera]
          Length = 756

 Score =  389 bits (998), Expect = e-106
 Identities = 203/305 (66%), Positives = 234/305 (76%), Gaps = 4/305 (1%)
 Frame = +3

Query: 9   KVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEEKQP----DDRGEAIAIMXX 176
           KVQVTVVDVS   N  E +  GDF FV + ++LS +FG  E+ P    +DRG+A+ IM  
Sbjct: 45  KVQVTVVDVSTHQN--EIDSVGDFIFVPRKDILSCYFGSMEQTPGPLPEDRGKAVGIMSK 102

Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356
                     ED                    A K++PIG+PK+IVSTVASG TEPY+GT
Sbjct: 103 ALEHYLKKAQEDHVLAGAIGIGGSGGTSIISSAFKSVPIGMPKIIVSTVASGQTEPYVGT 162

Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536
           SDLILFPSVVD+CGIN+VSRVVLSNAGAA AGMVIGR+   R++   NEK TVG+TMFGV
Sbjct: 163 SDLILFPSVVDVCGINNVSRVVLSNAGAAFAGMVIGRLQASRDSLSSNEKFTVGVTMFGV 222

Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716
           TT CVN VKERL KEGYET+VFHATG GGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV
Sbjct: 223 TTPCVNAVKERLVKEGYETLVFHATGTGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 282

Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896
           MACDSSRFD++IEKK+PLV+SVGALDMVNFGAK TIPS   +RNI++HNEQVSL+RTT D
Sbjct: 283 MACDSSRFDAMIEKKIPLVVSVGALDMVNFGAKTTIPSHLLKRNIHVHNEQVSLVRTTVD 342

Query: 897 ENKKF 911
           ENKKF
Sbjct: 343 ENKKF 347


>dbj|BAM65771.1| Tm-1 protein [Solanum habrochaites] gi|410610518|dbj|BAM65772.1|
           Tm-1 protein [Solanum habrochaites]
          Length = 754

 Score =  379 bits (972), Expect = e-103
 Identities = 205/305 (67%), Positives = 229/305 (75%), Gaps = 3/305 (0%)
 Frame = +3

Query: 6   FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEE---KQPDDRGEAIAIMXX 176
           FKV VTVVDVS S   KETN   DF FV   ++LS +    E   + PDDRG+AIAIM  
Sbjct: 44  FKVGVTVVDVSTSR--KETNSCADFDFVPSKDVLSCYAQGGESVVQLPDDRGQAIAIMNK 101

Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356
                      +Q                   A ++LPIG+PKVI+STVASG TE YIGT
Sbjct: 102 ALETFLSKANGEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161

Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536
           SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+   +E +  N K TVG+TMFGV
Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221

Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716
           TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV
Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281

Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896
           MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT  
Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGRKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341

Query: 897 ENKKF 911
           ENKKF
Sbjct: 342 ENKKF 346


>dbj|BAM48552.1| Tm-1 protein [Solanum habrochaites] gi|410610524|dbj|BAM65775.1|
           Tm-1 protein [Solanum habrochaites]
           gi|410610526|dbj|BAM65776.1| Tm-1 protein [Solanum
           habrochaites]
          Length = 754

 Score =  379 bits (972), Expect = e-103
 Identities = 205/305 (67%), Positives = 229/305 (75%), Gaps = 3/305 (0%)
 Frame = +3

Query: 6   FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEE---KQPDDRGEAIAIMXX 176
           FKV VTVVDVS S   KETN   DF FV   ++LS +    E   + PDDRG+AIAIM  
Sbjct: 44  FKVGVTVVDVSTSR--KETNSCADFDFVPSKDVLSCYAQGGESVVQLPDDRGQAIAIMNK 101

Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356
                      +Q                   A ++LPIG+PKVI+STVASG TE YIGT
Sbjct: 102 ALETFLSKAYGEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161

Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536
           SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+   +E +  N K TVG+TMFGV
Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221

Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716
           TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV
Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281

Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896
           MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT  
Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGRKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341

Query: 897 ENKKF 911
           ENKKF
Sbjct: 342 ENKKF 346


>dbj|BAM65813.1| Tm-1 protein [Solanum habrochaites]
          Length = 754

 Score =  376 bits (965), Expect = e-102
 Identities = 205/305 (67%), Positives = 227/305 (74%), Gaps = 3/305 (0%)
 Frame = +3

Query: 6   FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEEKQ---PDDRGEAIAIMXX 176
           FKV VTVVDVS S   KETN   DF FV   ++LS H   EE      D RG AIAIM  
Sbjct: 44  FKVGVTVVDVSTSW--KETNSCADFDFVPSKDVLSCHTLGEETMGTFADTRGLAIAIMSK 101

Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356
                     ++Q                   A ++LPIG+PKVI+STVASG TE YIGT
Sbjct: 102 ALETFLSIANDEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161

Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536
           SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+   +E +  N K TVG+TMFGV
Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221

Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716
           TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV
Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281

Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896
           MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT  
Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGPKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341

Query: 897 ENKKF 911
           ENKKF
Sbjct: 342 ENKKF 346


>dbj|BAM65811.1| Tm-1 protein [Solanum habrochaites]
          Length = 754

 Score =  376 bits (965), Expect = e-102
 Identities = 205/305 (67%), Positives = 227/305 (74%), Gaps = 3/305 (0%)
 Frame = +3

Query: 6   FKVQVTVVDVSCSHNNKETNGFGDFPFVNKNELLSHHFGLEEKQ---PDDRGEAIAIMXX 176
           FKV VTVVDVS S   KETN   DF FV   ++LS H   EE      D RG AIAIM  
Sbjct: 44  FKVGVTVVDVSTSW--KETNSCADFDFVPSKDVLSCHTLGEETMGTFADTRGLAIAIMSK 101

Query: 177 XXXXXXXXXXEDQXXXXXXXXXXXXXXXXXXXALKTLPIGVPKVIVSTVASGNTEPYIGT 356
                     ++Q                   A ++LPIG+PKVI+STVASG TE YIGT
Sbjct: 102 ALETFLSIANDEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGT 161

Query: 357 SDLILFPSVVDICGINSVSRVVLSNAGAAVAGMVIGRVSGFRETTRKNEKLTVGITMFGV 536
           SDL+LFPSVVDICGIN+VS+VVLSNAGAA AGMVIGR+   +E +  N K TVG+TMFGV
Sbjct: 162 SDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGV 221

Query: 537 TTSCVNVVKERLEKEGYETMVFHATGVGGRALEDLVKGGFIQGVLDITTTEVADYVVGGV 716
           TT CVN VKERL KEGYET+VFHATGVGGRA+EDLV+GGFIQGVLDITTTEVADYVVGGV
Sbjct: 222 TTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGV 281

Query: 717 MACDSSRFDSIIEKKVPLVLSVGALDMVNFGAKHTIPSEFHQRNIYIHNEQVSLMRTTAD 896
           MACDSSRFD+I+EKK+PLVLSVGALDMVNFG K TIP EF QR I+ HNEQVSLMRTT  
Sbjct: 282 MACDSSRFDAILEKKIPLVLSVGALDMVNFGPKTTIPPEFQQRKIHEHNEQVSLMRTTVG 341

Query: 897 ENKKF 911
           ENKKF
Sbjct: 342 ENKKF 346


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