BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000092
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop...   355   1e-95
ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|1...   352   8e-95
ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ...   349   7e-94
ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop...   345   1e-92
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop...   342   9e-92

>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
           sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
           ribosomal protein S5, chloroplastic-like [Cucumis
           sativus]
          Length = 307

 Score =  355 bits (912), Expect = 1e-95
 Identities = 176/253 (69%), Positives = 197/253 (77%)
 Frame = +2

Query: 230 KANSNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPA 409
           +A S+DIDTTFFD VNP+E+IV+DPP +PEG++PP  FDEGP+ETE+EIAA YEE+YGPA
Sbjct: 55  RAKSSDIDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPA 114

Query: 410 YSGVSVLGNDVYVMDAKIKKQTGFGSKMKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFR 589
           YSGVSVLGND+YVMD+K+KK  GFGSK KK+K RDGFDE                 LHFR
Sbjct: 115 YSGVSVLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFR 174

Query: 590 XXXXXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAK 769
                                     QKSAVNARRNI+TVPMTKY TFPHR++GDYGAAK
Sbjct: 175 AIVVVGDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAK 234

Query: 770 VMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDV 949
           VMLRPASPGTGVIAGG+VRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ M+QF DV
Sbjct: 235 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDV 294

Query: 950 ARERGIPMEELWK 988
           A+ERGIPMEELWK
Sbjct: 295 AQERGIPMEELWK 307


>ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|118487850|gb|ABK95748.1|
           unknown [Populus trichocarpa]
           gi|222848093|gb|EEE85640.1| predicted protein [Populus
           trichocarpa]
          Length = 311

 Score =  352 bits (904), Expect = 8e-95
 Identities = 177/253 (69%), Positives = 198/253 (78%)
 Frame = +2

Query: 230 KANSNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPA 409
           KANS+DIDT+FFD +NPEEE V+DPPT PE YIPP  FDEGP+ETE+EIAAAYEELYGPA
Sbjct: 59  KANSSDIDTSFFDNLNPEEEFVYDPPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPA 118

Query: 410 YSGVSVLGNDVYVMDAKIKKQTGFGSKMKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFR 589
           YSGVSVLG D+YVMD+K+KK +G+GS++KKEK++DGFDE                 LHFR
Sbjct: 119 YSGVSVLGKDIYVMDSKVKKTSGWGSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFR 178

Query: 590 XXXXXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAK 769
                                     QKSA+NARRNIITVPMTKY TFPHR++GD+GAAK
Sbjct: 179 AVVIVGDKQGRVGVGVGKAKEVIVAVQKSALNARRNIITVPMTKYLTFPHRSEGDFGAAK 238

Query: 770 VMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDV 949
           VMLRPASPGTGVIAGG+VRIVLEMAGVENALGKQL S NALNNARATVVAVQ MRQFS+V
Sbjct: 239 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLRSKNALNNARATVVAVQKMRQFSEV 298

Query: 950 ARERGIPMEELWK 988
           ARERGIPMEELWK
Sbjct: 299 ARERGIPMEELWK 311


>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
           gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 309

 Score =  349 bits (896), Expect = 7e-94
 Identities = 177/252 (70%), Positives = 195/252 (77%)
 Frame = +2

Query: 233 ANSNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPAY 412
           A+S+DIDTTFFD +NPE++IVFDPPT PE ++PP  FDE P+ETE+EIAAAYE+LYG  Y
Sbjct: 58  ASSSDIDTTFFDNLNPEDDIVFDPPTPPEDFVPPPSFDEEPMETEEEIAAAYEDLYGAGY 117

Query: 413 SGVSVLGNDVYVMDAKIKKQTGFGSKMKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFRX 592
           SGVS LGNDVYVMD+K+KK TGFGSK K+EK+RDGF+E                 LHFR 
Sbjct: 118 SGVSYLGNDVYVMDSKVKKTTGFGSKGKREKIRDGFEERVVQVRRVTKVVKGGKQLHFRA 177

Query: 593 XXXXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAKV 772
                                    QKSAVNARRNIITVPMTKY TFPHR+DGDYGAAKV
Sbjct: 178 IVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHRSDGDYGAAKV 237

Query: 773 MLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDVA 952
           MLRPASPGTGVIAGG+VRIVLEMAGVENALGKQ+GS NALNNARATVVAVQ MRQFSDVA
Sbjct: 238 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVA 297

Query: 953 RERGIPMEELWK 988
           RERGIPMEELWK
Sbjct: 298 RERGIPMEELWK 309


>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 300

 Score =  345 bits (885), Expect = 1e-92
 Identities = 175/250 (70%), Positives = 192/250 (76%)
 Frame = +2

Query: 239 SNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPAYSG 418
           S+DIDT+FFD +NP+++I F+PP  PEG++ P  FD+GP+ETEDEIAAAYEELYGP YSG
Sbjct: 51  SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 110

Query: 419 VSVLGNDVYVMDAKIKKQTGFGSKMKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFRXXX 598
           VSVLGNDVYVMDAK+KK+TGFGS  KKEKVRDGF+E                 L FR   
Sbjct: 111 VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 170

Query: 599 XXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAKVML 778
                                  QKSAVNARRNII VPMTKY+TFPHRADGDYGAAKVML
Sbjct: 171 VVGDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 230

Query: 779 RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDVARE 958
           RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ M+QF +VA E
Sbjct: 231 RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAEE 290

Query: 959 RGIPMEELWK 988
           RGIPMEELWK
Sbjct: 291 RGIPMEELWK 300


>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 316

 Score =  342 bits (878), Expect = 9e-92
 Identities = 173/250 (69%), Positives = 191/250 (76%)
 Frame = +2

Query: 239 SNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPAYSG 418
           S+DIDT+FFD +NP+++I F+PP  PEG++ P  FD+GP+ETEDEIAAAYEELYGP YSG
Sbjct: 67  SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 126

Query: 419 VSVLGNDVYVMDAKIKKQTGFGSKMKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFRXXX 598
           VSVLGNDVYVMDAK+KK+TGFGS  KKEKVRDGF+E                 L FR   
Sbjct: 127 VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 186

Query: 599 XXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAKVML 778
                                  QKSAVNARRNII VPMTKY+TFPHRADGDYGAAKVML
Sbjct: 187 VVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 246

Query: 779 RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDVARE 958
           RPASPGTGVIAGGSVRIVLEMAGV+NALGKQLGSNNALNNARATV AVQ M+QF +VA E
Sbjct: 247 RPASPGTGVIAGGSVRIVLEMAGVDNALGKQLGSNNALNNARATVAAVQKMKQFREVAEE 306

Query: 959 RGIPMEELWK 988
           RGIPMEELWK
Sbjct: 307 RGIPMEELWK 316