BLASTX nr result

ID: Coptis23_contig00000088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000088
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523543.1| zinc finger protein, putative [Ricinus commu...   150   1e-34
ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_003542623.1| PREDICTED: uncharacterized protein LOC100802...   147   1e-33
ref|XP_004146703.1| PREDICTED: uncharacterized protein LOC101215...   144   9e-33
ref|XP_003549703.1| PREDICTED: uncharacterized protein LOC100781...   142   3e-32

>ref|XP_002523543.1| zinc finger protein, putative [Ricinus communis]
            gi|223537250|gb|EEF38882.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 775

 Score =  150 bits (380), Expect = 1e-34
 Identities = 89/195 (45%), Positives = 116/195 (59%), Gaps = 12/195 (6%)
 Frame = +2

Query: 2    ASGRRQAGKQGPTFANQPVSFVSSGVMEVDVVKGIPSVDLDEKNKTLSESTIVTSSSNLG 181
            ++ +RQ G++G  +A+QPVSFVSSG+M     + +    +D K    SE+   TS++ +G
Sbjct: 591  SASKRQGGRKG-LYADQPVSFVSSGIMS----EAVEMTTMDSKETETSENKDTTSTAKVG 645

Query: 182  GFEMHTKGFGSKMMAKMXXXXXXXXXXXXXXIVEPIEAIQRPKSLGLGVEFSETNDNSIS 361
             FE+HTKGFGSKMMAKM              I EPIEAIQRPKSLGLG    +TN + + 
Sbjct: 646  AFEVHTKGFGSKMMAKMGFVEGGGLGRDGQGIAEPIEAIQRPKSLGLGANIPDTNGDPMD 705

Query: 362  K--ESMGLRGSKKQHKGYEESHGVGAFEKHIK----------GFVEGSGLGRDRQGISNP 505
               +S G  G       + +   +GAFEKH K          GFVEG GLG++ QGI NP
Sbjct: 706  NKLQSAGRLGK------HAKLQSLGAFEKHTKGFGSKMMARMGFVEGMGLGKNSQGIVNP 759

Query: 506  LTPVRVPKSQGLGAK 550
            L  VR+PKS+GLGAK
Sbjct: 760  LAAVRLPKSRGLGAK 774


>ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|222866596|gb|EEF03727.1|
            predicted protein [Populus trichocarpa]
          Length = 737

 Score =  149 bits (377), Expect = 3e-34
 Identities = 90/193 (46%), Positives = 118/193 (61%), Gaps = 11/193 (5%)
 Frame = +2

Query: 5    SGRRQAGKQGPTFANQPVSFVSSGVMEVDVVKGIPSVDLDEKNKTLSESTIVTSSSNLGG 184
            +G   +G +   +ANQPVSFVSSGVM+   V+ I +VD  E N+T  E    TSSS  G 
Sbjct: 549  NGLYASGGRNGLYANQPVSFVSSGVMQSGDVETI-TVDSREINET-GEKKDATSSSKFGA 606

Query: 185  FEMHTKGFGSKMMAKMXXXXXXXXXXXXXXIVEPIEAIQRPKSLGLGVEFSETNDNSISK 364
            FE+HTKGFGSKMMAKM              + +P+E  QRPKSLGLGV+FS+ + +S+  
Sbjct: 607  FEVHTKGFGSKMMAKMGFIEGGGLGKDGQGMAQPVEVTQRPKSLGLGVDFSDISVDSVKN 666

Query: 365  ESMGLR-GSKKQHKGYEESHGVGAFEKHIK----------GFVEGSGLGRDRQGISNPLT 511
            +    R G+  +H    ++  +GAFEKH K          GFVEG GLG+D QGI NP+ 
Sbjct: 667  KPQSSRTGTSGKH---SKTENLGAFEKHTKGFGSKIMAKMGFVEGMGLGKDSQGIVNPIV 723

Query: 512  PVRVPKSQGLGAK 550
             V+ PK++GLGAK
Sbjct: 724  AVKRPKARGLGAK 736


>ref|XP_003542623.1| PREDICTED: uncharacterized protein LOC100802615 [Glycine max]
          Length = 762

 Score =  147 bits (372), Expect = 1e-33
 Identities = 93/201 (46%), Positives = 122/201 (60%), Gaps = 21/201 (10%)
 Frame = +2

Query: 11   RRQAGKQGPTFANQPVSFVSSGVMEVDVVKGIPSVDLDEKNKTLSESTIVTSSSNLGGFE 190
            ++ +G++G ++ANQPVSFVSSG++  + V+   +VD +E N+       VTSS+N+G FE
Sbjct: 570  KKGSGQKG-SYANQPVSFVSSGLIHSETVQ--VTVDAEETNRNG-----VTSSANIGSFE 621

Query: 191  MHTKGFGSKMMAKMXXXXXXXXXXXXXXIVEPIEAIQRPKSLGLGVEFSETNDNSISKES 370
             HT GFGSKMMAKM              + +PIE IQRPKSLGLGVEFS  +      +S
Sbjct: 622  EHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRPKSLGLGVEFSNNSAEPARNKS 681

Query: 371  MGLRGSKKQHKGYE-----------ESHGVGAFEKHIK----------GFVEGSGLGRDR 487
              + G+K    G E           +S  VGAFEKH K          GFVEG+GLGR+ 
Sbjct: 682  SRV-GAKSLGVGVEFSNSPAKPAPNKSSNVGAFEKHTKGFGSKMMAKMGFVEGTGLGRES 740

Query: 488  QGISNPLTPVRVPKSQGLGAK 550
            QGI+ PL+ VR+PKS+GLGAK
Sbjct: 741  QGITTPLSAVRLPKSRGLGAK 761


>ref|XP_004146703.1| PREDICTED: uncharacterized protein LOC101215133 [Cucumis sativus]
          Length = 793

 Score =  144 bits (364), Expect = 9e-33
 Identities = 86/207 (41%), Positives = 124/207 (59%), Gaps = 25/207 (12%)
 Frame = +2

Query: 5    SGRRQAGKQGPTFANQPVSFVSSGVMEVDVVKGIPSVDLDEKNK-----TLSESTIVTSS 169
            S ++  GK+   +A+QPVSFVSSGVM+ + ++  P  D+++ +K      +SE   +T+S
Sbjct: 589  SSQKMTGKK---YADQPVSFVSSGVMQPESMEEKPVNDVNDADKGKDIVAVSEMIEMTTS 645

Query: 170  S---------NLGGFEMHTKGFGSKMMAKMXXXXXXXXXXXXXXIVEPIEAIQRPKSLGL 322
            +         ++G FE+HTKGFGSKMMAKM              +  PIE ++RPKSLGL
Sbjct: 646  NVNNMDISRDSIGSFELHTKGFGSKMMAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGL 705

Query: 323  GVEFSETNDNSI-SKESMGLRGSKKQHKGYEESHGVGAFEKHIK----------GFVEGS 469
            G+EFSE + ++    ++ G+  ++      E++  +GAFE H K          GFVEG 
Sbjct: 706  GIEFSEASTSAAGDNQASGISSARTGSSALEKTKKIGAFEVHTKGFGSKMMAKMGFVEGM 765

Query: 470  GLGRDRQGISNPLTPVRVPKSQGLGAK 550
            GLG+D QGI NPL PVR PK++GLGAK
Sbjct: 766  GLGKDSQGIINPLLPVRRPKARGLGAK 792


>ref|XP_003549703.1| PREDICTED: uncharacterized protein LOC100781443 [Glycine max]
          Length = 767

 Score =  142 bits (359), Expect = 3e-32
 Identities = 88/196 (44%), Positives = 118/196 (60%), Gaps = 20/196 (10%)
 Frame = +2

Query: 23   GKQGPTFANQPVSFVSSGVMEVDVVKGIPSVDLDEKNKTLSESTIVTSSSNLGGFEMHTK 202
            G++G ++ANQPVSFVSSG++  + ++ +  VD +E N+       VTSS+N+G FE HT 
Sbjct: 578  GQKG-SYANQPVSFVSSGLINSETLQ-VTVVDAEETNRKG-----VTSSANIGSFEEHTT 630

Query: 203  GFGSKMMAKMXXXXXXXXXXXXXXIVEPIEAIQRPKSLGLGVEF-------SETNDNSIS 361
            GFGSKMMAKM              + +PIE IQRPKSLGLGVEF       +    + + 
Sbjct: 631  GFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRPKSLGLGVEFYNNSAEPARNKSSRVG 690

Query: 362  KESMGLR---GSKKQHKGYEESHGVGAFEKHIK----------GFVEGSGLGRDRQGISN 502
             +S+GL     +        +S  VG+FEKH K          GFVEG+GLGR+ QGI+ 
Sbjct: 691  AKSLGLGVEFSNSPAEPARNKSSKVGSFEKHTKGFGSKMMAKMGFVEGNGLGRESQGITT 750

Query: 503  PLTPVRVPKSQGLGAK 550
            PL+ VR+PKS+GLGAK
Sbjct: 751  PLSAVRLPKSRGLGAK 766


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