BLASTX nr result

ID: Coptis23_contig00000080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000080
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267008.1| PREDICTED: ethylene-responsive transcription...   187   8e-75
gb|ADC94859.1| ERF2 transcription factor [Vitis pseudoreticulata]     183   1e-73
emb|CAE54591.1| ethylene transcription factor [Fagus sylvatica]       180   9e-73
emb|CAD21849.1| ethylene responsive element binding protein [Fag...   184   1e-72
gb|ADE41104.1| AP2 domain class transcription factor [Malus x do...   174   3e-71

>ref|XP_002267008.1| PREDICTED: ethylene-responsive transcription factor RAP2-12-like
           [Vitis vinifera]
          Length = 379

 Score =  187 bits (476), Expect(2) = 8e-75
 Identities = 100/199 (50%), Positives = 126/199 (63%), Gaps = 17/199 (8%)
 Frame = +3

Query: 333 KALPTGNHTLERPVFNQDFSLMNYSSDDSLG-FVEEKP-----------PVMGSEFFVSM 476
           K +P G+        NQ F+ MN S  +     ++EKP           P  G     S+
Sbjct: 182 KLIPKGSPNSSHSNLNQSFNFMNNSDQEYYSSLMDEKPSTNQYGYPDSFPANGEVGLKSL 241

Query: 477 KDQT-----FTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEDANPSK 641
                    F SDQGSNS +CSD GWG Q  KTPEI+SVLS  +E +E ++F+EDANP K
Sbjct: 242 APSENGRMYFNSDQGSNSFDCSDLGWGEQGAKTPEISSVLSATLEGDE-SQFIEDANPKK 300

Query: 642 KQKTNSEIAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGG 821
           K K+NS+ AVPVE NT   L E+LSAFESQMK+ QIPYL+G+W+ SMD+L SGD   +GG
Sbjct: 301 KLKSNSQNAVPVEENTPNGLSEDLSAFESQMKYFQIPYLDGNWEASMDALLSGDAAQDGG 360

Query: 822 SSMDLWSFDDLPQMVGGIF 878
           + MDLWSFDDLP +VGG+F
Sbjct: 361 NPMDLWSFDDLPTVVGGVF 379



 Score =  120 bits (301), Expect(2) = 8e-75
 Identities = 57/75 (76%), Positives = 59/75 (78%)
 Frame = +2

Query: 2   EFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXX 181
           EFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT           
Sbjct: 91  EFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAE 150

Query: 182 XXXIRGNKAKVNFPE 226
              IRG KAKVNFP+
Sbjct: 151 ARRIRGKKAKVNFPD 165


>gb|ADC94859.1| ERF2 transcription factor [Vitis pseudoreticulata]
          Length = 376

 Score =  183 bits (465), Expect(2) = 1e-73
 Identities = 100/199 (50%), Positives = 123/199 (61%), Gaps = 17/199 (8%)
 Frame = +3

Query: 333 KALPTGNHTLERPVFNQDFSLMNYSSDDSLG-FVEEKP-----------PVMGSEFFVSM 476
           K +P G+        NQ F+ MN S  +     ++EKP           P  G     S+
Sbjct: 179 KLIPKGSPNPSHSNLNQSFNFMNNSDQEYYSSLMDEKPSTNQHGYPDSFPANGEVGLKSL 238

Query: 477 KDQT-----FTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEDANPSK 641
                    F SDQGSNS +CSD GWG Q  KTPEI+SVLS  +E +E   F+EDA+P K
Sbjct: 239 APSENGRMYFNSDQGSNSFDCSDLGWGEQGAKTPEISSVLSATLEGDESL-FIEDASPKK 297

Query: 642 KQKTNSEIAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGG 821
           K K+NS+ AVPVE NT   L E+LSAFESQMK+ QIPYL+GSW+ SMD L SGD   +GG
Sbjct: 298 KLKSNSQNAVPVEENTPNGLFEDLSAFESQMKYFQIPYLDGSWEASMDPLLSGDAAQDGG 357

Query: 822 SSMDLWSFDDLPQMVGGIF 878
           + MDLWSFDDLP +VGG+F
Sbjct: 358 NPMDLWSFDDLPTVVGGVF 376



 Score =  120 bits (301), Expect(2) = 1e-73
 Identities = 57/75 (76%), Positives = 59/75 (78%)
 Frame = +2

Query: 2   EFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXX 181
           EFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT           
Sbjct: 88  EFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAE 147

Query: 182 XXXIRGNKAKVNFPE 226
              IRG KAKVNFP+
Sbjct: 148 ARRIRGKKAKVNFPD 162


>emb|CAE54591.1| ethylene transcription factor [Fagus sylvatica]
          Length = 378

 Score =  180 bits (456), Expect(2) = 9e-73
 Identities = 103/197 (52%), Positives = 131/197 (66%), Gaps = 16/197 (8%)
 Frame = +3

Query: 333 KALPTGNHTLERPVFNQDFSLMNYSSDD-SLGFVEEKPPV--------------MGSEFF 467
           K L   N    +P  NQ+F+ MN S  D ++G +EEKP                +G + F
Sbjct: 184 KPLAKANLNSVQPNLNQNFNFMNNSDQDYTMGLMEEKPFTNQYGYMDSIPANADVGLKPF 243

Query: 468 VSMKDQT-FTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEDANPSKK 644
            S      F SDQGSNS +CSD+GWG Q  KTPEI+SVLS  +E +E ++F+EDA P+KK
Sbjct: 244 ASNNTTPYFNSDQGSNSFDCSDYGWGEQGSKTPEISSVLSATLEGDE-SQFVEDAMPTKK 302

Query: 645 QKTNSEIAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGS 824
            K++S  AV +E NTAK L EELSAFESQM F Q+P+LEGSW+ +M++LFSGDTT   G+
Sbjct: 303 LKSDSGNAVFIENNTAKTLSEELSAFESQMNF-QMPFLEGSWESNMEALFSGDTT-QDGN 360

Query: 825 SMDLWSFDDLPQMVGGI 875
           SMDLWSFDDLP M GG+
Sbjct: 361 SMDLWSFDDLPVMAGGV 377



 Score =  121 bits (303), Expect(2) = 9e-73
 Identities = 60/84 (71%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   EFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXX 181
           EFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT           
Sbjct: 93  EFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEKAARAYDAE 152

Query: 182 XXXIRGNKAKVNFPEH--KNSPAR 247
              IRG KAKVNFP+   + SP R
Sbjct: 153 ARRIRGKKAKVNFPDETPRASPKR 176


>emb|CAD21849.1| ethylene responsive element binding protein [Fagus sylvatica]
          Length = 375

 Score =  184 bits (466), Expect(2) = 1e-72
 Identities = 104/196 (53%), Positives = 132/196 (67%), Gaps = 15/196 (7%)
 Frame = +3

Query: 333 KALPTGNHTLERPVFNQDFSLMNYSSDDSLGFVEEKP-----------PV---MGSEFFV 470
           K L   N    +P  NQ+F+ MN   D ++G +EEKP           PV   +G + F 
Sbjct: 182 KPLAKANLNSVQPNLNQNFNFMNSDQDYTMGLMEEKPFTNQYGYMDSIPVNADVGLKSFA 241

Query: 471 SMKDQT-FTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEDANPSKKQ 647
           S      F SDQGSNS +CSD+GWG Q  KTPEI+SVLS  +E +E ++F+EDA P+KK 
Sbjct: 242 SNNTAPYFNSDQGSNSFDCSDYGWGEQGSKTPEISSVLSATLEGDE-SQFVEDAVPTKKL 300

Query: 648 KTNSEIAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGSS 827
           K++S  AV +E NTAK L EELSAFESQM F Q+P+LEGSW+ +M++LFSGDTT   G+S
Sbjct: 301 KSDSGNAVFIENNTAKTLSEELSAFESQMNF-QMPFLEGSWESNMEALFSGDTT-QDGNS 358

Query: 828 MDLWSFDDLPQMVGGI 875
           MDLWSFDDLP M GG+
Sbjct: 359 MDLWSFDDLPVMAGGV 374



 Score =  117 bits (292), Expect(2) = 1e-72
 Identities = 57/82 (69%), Positives = 59/82 (71%)
 Frame = +2

Query: 2   EFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXX 181
           EFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT           
Sbjct: 93  EFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAE 152

Query: 182 XXXIRGNKAKVNFPEHKNSPAR 247
              IRG K+K NFP     P R
Sbjct: 153 ARRIRGKKSKGNFPMRLPVPKR 174


>gb|ADE41104.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 387

 Score =  174 bits (442), Expect(2) = 3e-71
 Identities = 95/201 (47%), Positives = 127/201 (63%), Gaps = 19/201 (9%)
 Frame = +3

Query: 333 KALPTGNHTLERPVFNQDFSLMNYSSDD---SLGFVEEKPPVMGSEFF--------VSMK 479
           K +P  N        NQ+F+ +N SS D   +LGF++EKP +    +         V++K
Sbjct: 189 KLIPKTNVNGTESNLNQNFNFVNDSSQDYYSALGFLDEKPTLNNFGYMSTFLANGDVALK 248

Query: 480 DQT--------FTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEDANP 635
             T         +SDQGSNS +CSDFGWG Q  KTPEI+SVLS+V+E  + + F+EDANP
Sbjct: 249 SSTPSDPAPFYLSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSSVMEETDDSLFLEDANP 308

Query: 636 SKKQKTNSEIAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLN 815
           +KK K NS+  V  + N  K L +ELSAFE  MK+ Q PYL+GSWD S+D+  +GD T +
Sbjct: 309 TKKLKPNSQDLVLPQDNAGKTLSDELSAFE--MKYFQTPYLDGSWDASVDAFLNGDATQD 366

Query: 816 GGSSMDLWSFDDLPQMVGGIF 878
           GG+  DLW+FDDLP +VGG F
Sbjct: 367 GGNPGDLWTFDDLPAIVGGTF 387



 Score =  121 bits (304), Expect(2) = 3e-71
 Identities = 58/75 (77%), Positives = 59/75 (78%)
 Frame = +2

Query: 2   EFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXX 181
           EFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT           
Sbjct: 98  EFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAE 157

Query: 182 XXXIRGNKAKVNFPE 226
              IRG KAKVNFPE
Sbjct: 158 ARRIRGKKAKVNFPE 172


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