BLASTX nr result

ID: Coptis23_contig00000078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000078
         (1452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529256.1| ER lumen protein retaining receptor, putativ...   234   e-122
ref|XP_004136381.1| PREDICTED: ER lumen protein retaining recept...   232   e-121
ref|XP_002445745.1| hypothetical protein SORBIDRAFT_07g024960 [S...   241   e-121
ref|NP_001148789.1| ER lumen protein retaining receptor C28H8.4 ...   240   e-121
tpg|DAA48757.1| TPA: hypothetical protein ZEAMMB73_112733 [Zea m...   238   e-120

>ref|XP_002529256.1| ER lumen protein retaining receptor, putative [Ricinus communis]
            gi|223531292|gb|EEF33134.1| ER lumen protein retaining
            receptor, putative [Ricinus communis]
          Length = 272

 Score =  234 bits (598), Expect(2) = e-122
 Identities = 120/162 (74%), Positives = 127/162 (78%)
 Frame = +3

Query: 555  IVPCAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRXXXXXXXXXXXXXXXXXXX 734
            +VPCA+LAL+IHPSTSH+I NRI WAFCVYLEAVSVLPQLR                   
Sbjct: 142  VVPCAILALLIHPSTSHNIVNRIFWAFCVYLEAVSVLPQLR------------------- 182

Query: 735  XXXXXXXXXXXXVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG 914
                        VMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRG LL ALGYG
Sbjct: 183  ------------VMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG 230

Query: 915  LWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLVLRLPSGVV 1040
            LWPSMVL+SEIVQTFILADFCYYY+KS+FGGQLVLRLPSGVV
Sbjct: 231  LWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272



 Score =  231 bits (589), Expect(2) = e-122
 Identities = 111/145 (76%), Positives = 125/145 (86%)
 Frame = +2

Query: 59  ASRRPVYAVATWVKRQPPKVKAFLAVVSGMAALAFLRFIVHDHDNLFVAAEAVHAIGICV 238
           A +RP++AV+TWV+RQPPKVKAFLAVV+GMAAL FLRFIVHDHDNLFVAAEAVH+IGI V
Sbjct: 3   APKRPIHAVSTWVRRQPPKVKAFLAVVAGMAALVFLRFIVHDHDNLFVAAEAVHSIGIIV 62

Query: 239 LIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVMYTIH 418
           LIYKL KE+TCAGLSLKSQ LTA+FLAVRLYCSFVMEYDIH            WV+Y I 
Sbjct: 63  LIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDLATLGTTLWVIYMIR 122

Query: 419 FQLKSSYMEDKDNFSLYYVIVPCAV 493
           F LKSSYMEDKDNF++YYV+VPCA+
Sbjct: 123 FNLKSSYMEDKDNFAIYYVVVPCAI 147


>ref|XP_004136381.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis
           sativus] gi|449505760|ref|XP_004162562.1| PREDICTED: ER
           lumen protein retaining receptor-like [Cucumis sativus]
          Length = 272

 Score =  232 bits (591), Expect(2) = e-121
 Identities = 113/145 (77%), Positives = 124/145 (85%)
 Frame = +2

Query: 59  ASRRPVYAVATWVKRQPPKVKAFLAVVSGMAALAFLRFIVHDHDNLFVAAEAVHAIGICV 238
           A++RP+ AVATWV+RQPPK+KAFLAVVSGMAAL FLRF+VHDHDNLFVAAEAVHAIGI V
Sbjct: 3   ATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGISV 62

Query: 239 LIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVMYTIH 418
           LIYKL KERTCAGLSLKSQ LTAIFLAVRLYCSFVMEYDIH            WV+Y I 
Sbjct: 63  LIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYMIR 122

Query: 419 FQLKSSYMEDKDNFSLYYVIVPCAV 493
           F+L+SSYMEDKDNF +YYV VPCA+
Sbjct: 123 FKLRSSYMEDKDNFPIYYVAVPCAL 147



 Score =  232 bits (591), Expect(2) = e-121
 Identities = 120/161 (74%), Positives = 125/161 (77%)
 Frame = +3

Query: 558  VPCAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRXXXXXXXXXXXXXXXXXXXX 737
            VPCA+L+ VIHP+T H+I NRI WAFCVYLEAVSVLPQLR                    
Sbjct: 143  VPCALLSFVIHPTTVHNIINRIAWAFCVYLEAVSVLPQLR-------------------- 182

Query: 738  XXXXXXXXXXXVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGL 917
                       VMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGL
Sbjct: 183  -----------VMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGL 231

Query: 918  WPSMVLLSEIVQTFILADFCYYYMKSLFGGQLVLRLPSGVV 1040
            WPSMVLLSEIVQTFILADFCYYY+KSL GGQLVLRLPSGVV
Sbjct: 232  WPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 272


>ref|XP_002445745.1| hypothetical protein SORBIDRAFT_07g024960 [Sorghum bicolor]
            gi|241942095|gb|EES15240.1| hypothetical protein
            SORBIDRAFT_07g024960 [Sorghum bicolor]
          Length = 273

 Score =  241 bits (616), Expect(2) = e-121
 Identities = 123/162 (75%), Positives = 130/162 (80%)
 Frame = +3

Query: 555  IVPCAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRXXXXXXXXXXXXXXXXXXX 734
            ++PCAVLAL+IHPSTSH+I NRICWAFCVYLEAVSVLPQLR                   
Sbjct: 143  VLPCAVLALLIHPSTSHNIVNRICWAFCVYLEAVSVLPQLR------------------- 183

Query: 735  XXXXXXXXXXXXVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG 914
                        +MQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG
Sbjct: 184  ------------LMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG 231

Query: 915  LWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLVLRLPSGVV 1040
            LWPSMVLLSEIVQTFILADFCYYY+KS+FGGQLVLRLPSGVV
Sbjct: 232  LWPSMVLLSEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 273



 Score =  221 bits (564), Expect(2) = e-121
 Identities = 110/149 (73%), Positives = 125/149 (83%)
 Frame = +2

Query: 47  MRGSASRRPVYAVATWVKRQPPKVKAFLAVVSGMAALAFLRFIVHDHDNLFVAAEAVHAI 226
           MRGS SRRPV  V  W++RQPPKVKAFLAVV+GMAAL F+RFIVHDHDNLFVAAEA HA+
Sbjct: 1   MRGS-SRRPVAVVMAWMRRQPPKVKAFLAVVAGMAALVFIRFIVHDHDNLFVAAEAAHAL 59

Query: 227 GICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVM 406
           GI VLIYKLTKE+TCAGLSLKSQ LTA+FLAVRLYCSFVMEYDIH            +V+
Sbjct: 60  GIAVLIYKLTKEKTCAGLSLKSQDLTALFLAVRLYCSFVMEYDIHTILDTATLAATLFVI 119

Query: 407 YTIHFQLKSSYMEDKDNFSLYYVIVPCAV 493
           Y I F+L+S+YM DKDNF+LYYV++PCAV
Sbjct: 120 YMIRFKLRSTYMLDKDNFALYYVVLPCAV 148


>ref|NP_001148789.1| ER lumen protein retaining receptor C28H8.4 [Zea mays]
            gi|195622166|gb|ACG32913.1| ER lumen protein retaining
            receptor C28H8.4 [Zea mays] gi|224030517|gb|ACN34334.1|
            unknown [Zea mays] gi|413925724|gb|AFW65656.1| ER lumen
            protein retaining receptor C28H8.4 [Zea mays]
          Length = 273

 Score =  240 bits (613), Expect(2) = e-121
 Identities = 122/162 (75%), Positives = 130/162 (80%)
 Frame = +3

Query: 555  IVPCAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRXXXXXXXXXXXXXXXXXXX 734
            I+PCA+LAL++HPSTSH+I NRICWAFCVYLEAVSVLPQLR                   
Sbjct: 143  ILPCALLALLVHPSTSHNIVNRICWAFCVYLEAVSVLPQLR------------------- 183

Query: 735  XXXXXXXXXXXXVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG 914
                        +MQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG
Sbjct: 184  ------------LMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG 231

Query: 915  LWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLVLRLPSGVV 1040
            LWPSMVLLSEIVQTFILADFCYYY+KS+FGGQLVLRLPSGVV
Sbjct: 232  LWPSMVLLSEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 273



 Score =  222 bits (565), Expect(2) = e-121
 Identities = 111/149 (74%), Positives = 125/149 (83%)
 Frame = +2

Query: 47  MRGSASRRPVYAVATWVKRQPPKVKAFLAVVSGMAALAFLRFIVHDHDNLFVAAEAVHAI 226
           MRGS SRRPV  V  WV+RQPPKVKAFLAVV+GMAAL F+RFIVHDHDNLFVAAEA HA+
Sbjct: 1   MRGS-SRRPVAVVMAWVRRQPPKVKAFLAVVAGMAALVFIRFIVHDHDNLFVAAEAAHAL 59

Query: 227 GICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVM 406
           GI VLIYKLTKE+TCAGLSLKSQ LTA+FLAVRLYCSFVMEYDIH            +V+
Sbjct: 60  GIAVLIYKLTKEKTCAGLSLKSQDLTALFLAVRLYCSFVMEYDIHTILDTAALAATLFVI 119

Query: 407 YTIHFQLKSSYMEDKDNFSLYYVIVPCAV 493
           Y I F+L+S+YM DKDNF+LYYVI+PCA+
Sbjct: 120 YMIRFKLRSTYMLDKDNFALYYVILPCAL 148


>tpg|DAA48757.1| TPA: hypothetical protein ZEAMMB73_112733 [Zea mays]
          Length = 273

 Score =  238 bits (608), Expect(2) = e-120
 Identities = 121/162 (74%), Positives = 129/162 (79%)
 Frame = +3

Query: 555  IVPCAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRXXXXXXXXXXXXXXXXXXX 734
            ++PCAVLAL++HPSTSH+I NRICWAFCVYLEAVSVLPQLR                   
Sbjct: 143  VLPCAVLALLVHPSTSHNIVNRICWAFCVYLEAVSVLPQLR------------------- 183

Query: 735  XXXXXXXXXXXXVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG 914
                        +MQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRG LLTALGYG
Sbjct: 184  ------------LMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGGLLTALGYG 231

Query: 915  LWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLVLRLPSGVV 1040
            LWPSMVLLSEIVQTFILADFCYYY+KS+FGGQLVLRLPSGVV
Sbjct: 232  LWPSMVLLSEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 273



 Score =  223 bits (567), Expect(2) = e-120
 Identities = 111/149 (74%), Positives = 125/149 (83%)
 Frame = +2

Query: 47  MRGSASRRPVYAVATWVKRQPPKVKAFLAVVSGMAALAFLRFIVHDHDNLFVAAEAVHAI 226
           MRGS SRRPV  V  WV+RQPPKVKAFLAVV+GMAAL F+RFIVHDHDNLFVAAEA HA+
Sbjct: 1   MRGS-SRRPVAVVMAWVRRQPPKVKAFLAVVAGMAALVFIRFIVHDHDNLFVAAEAAHAL 59

Query: 227 GICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVM 406
           GI VLIYKLTKE+TCAGLSLKSQ LTA+FLAVRLYCSFVMEYDIH            +V+
Sbjct: 60  GIAVLIYKLTKEKTCAGLSLKSQDLTALFLAVRLYCSFVMEYDIHTILDTATLAATLFVI 119

Query: 407 YTIHFQLKSSYMEDKDNFSLYYVIVPCAV 493
           Y I F+L+S+YM DKDNF+LYYV++PCAV
Sbjct: 120 YMIRFKLRSTYMLDKDNFALYYVVLPCAV 148


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