BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000065
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia ...   422   e-115
gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]       422   e-115
gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [...   421   e-115
dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]       420   e-115
ref|XP_002531690.1| chlorophyll A/B binding protein, putative [R...   419   e-115

>gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
          Length = 265

 Score =  422 bits (1084), Expect = e-115
 Identities = 210/268 (78%), Positives = 221/268 (82%), Gaps = 1/268 (0%)
 Frame = +2

Query: 185 MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSSSQSIWYGPDRPKYLGP 361
           MATS +QQSAFAGQ ALKPQNELVRKVG+FGG   +MRRTVKS+ +SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKPQNELVRKVGSFGGGHITMRRTVKSAPESIWYGPDRPKYLGP 60

Query: 362 FSEQTPSYLTGEFPGDYGWDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEL 541
           FSEQTPSYLTGEFPGDYGWDT                                    PE+
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF---PEI 117

Query: 542 LSKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIG 721
           L+KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWA QVVLMGFVEGYR+G
Sbjct: 118 LAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVG 177

Query: 722 GGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 901
           GGPLG GLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGWGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237

Query: 902 PIENLYDHLADPTVNNAWAYATNFVPGK 985
           PIENLYDHLADP  NNAWAYATNFVPGK
Sbjct: 238 PIENLYDHLADPVANNAWAYATNFVPGK 265


>gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
          Length = 265

 Score =  422 bits (1084), Expect = e-115
 Identities = 208/268 (77%), Positives = 221/268 (82%), Gaps = 1/268 (0%)
 Frame = +2

Query: 185 MATSVVQQSAFAGQIALKPQNELVRKVGTF-GGRFSMRRTVKSSSQSIWYGPDRPKYLGP 361
           MATS +QQSAFAG  ALKPQNELV+K G+F GGRF+MRRTVKS+ QSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGSAALKPQNELVKKTGSFTGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 362 FSEQTPSYLTGEFPGDYGWDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEL 541
           FSEQTPSYLTGEFPGDYGWDT                                    PE+
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF---PEV 117

Query: 542 LSKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIG 721
           LSKNGVKFGEAVWFKAGSQIF+EGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYR+G
Sbjct: 118 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVG 177

Query: 722 GGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 901
           GGPLGEGLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237

Query: 902 PIENLYDHLADPTVNNAWAYATNFVPGK 985
           PIENL+DHL+DP  NNAWAYATNFVPGK
Sbjct: 238 PIENLFDHLSDPVANNAWAYATNFVPGK 265


>gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
           longiflorum]
          Length = 264

 Score =  421 bits (1082), Expect = e-115
 Identities = 209/267 (78%), Positives = 219/267 (82%)
 Frame = +2

Query: 185 MATSVVQQSAFAGQIALKPQNELVRKVGTFGGRFSMRRTVKSSSQSIWYGPDRPKYLGPF 364
           MATS +QQSAF GQ ALK ++ELVRKVG  GGR SMRRTVKS+ QSIWYG DRPKYLGPF
Sbjct: 1   MATSAIQQSAFTGQTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPF 60

Query: 365 SEQTPSYLTGEFPGDYGWDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELL 544
           SEQTPSYLTGEFPGDYGWDT                                    PELL
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF---PELL 117

Query: 545 SKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGG 724
           SKNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWAVQVVLMGF+EGYRIGG
Sbjct: 118 SKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGG 177

Query: 725 GPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 904
           GPLGEGLD LYPGG+FDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 178 GPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237

Query: 905 IENLYDHLADPTVNNAWAYATNFVPGK 985
           +ENLYDHLADP  NNAWAYATNFVPGK
Sbjct: 238 VENLYDHLADPATNNAWAYATNFVPGK 264


>dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
          Length = 265

 Score =  420 bits (1080), Expect = e-115
 Identities = 207/268 (77%), Positives = 222/268 (82%), Gaps = 1/268 (0%)
 Frame = +2

Query: 185 MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSSSQSIWYGPDRPKYLGP 361
           MATS +Q+SAFAGQ ALKPQNELVRK+G+ GG R +MRRTV+S+ +SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQRSAFAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGP 60

Query: 362 FSEQTPSYLTGEFPGDYGWDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEL 541
           FSEQTPSYLTGEFPGDYGWDT                                    PE+
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF---PEI 117

Query: 542 LSKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIG 721
           L++NGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWA QVVLMGFVEGYR+G
Sbjct: 118 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVG 177

Query: 722 GGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 901
           GGPLGEGLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237

Query: 902 PIENLYDHLADPTVNNAWAYATNFVPGK 985
           PIENLYDHLADP  NNAWAYATNFVPGK
Sbjct: 238 PIENLYDHLADPVANNAWAYATNFVPGK 265


>ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223528666|gb|EEF30681.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  419 bits (1076), Expect = e-115
 Identities = 206/268 (76%), Positives = 221/268 (82%), Gaps = 1/268 (0%)
 Frame = +2

Query: 185 MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSSSQSIWYGPDRPKYLGP 361
           MATS +QQSAFAGQ ALKP NELVRKVG+ GG R +MRRTVKS+ QSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKPSNELVRKVGSVGGGRITMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 362 FSEQTPSYLTGEFPGDYGWDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEL 541
           FSEQTPSYLTGEFPGDYGWDT                                    PE+
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF---PEI 117

Query: 542 LSKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIG 721
           L+KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+G
Sbjct: 118 LAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVG 177

Query: 722 GGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 901
           GGPLGEGLD +YPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237

Query: 902 PIENLYDHLADPTVNNAWAYATNFVPGK 985
           PIENL+DH+ADP  NNAWAYATNFVPGK
Sbjct: 238 PIENLFDHVADPVANNAWAYATNFVPGK 265