BLASTX nr result

ID: Coptis23_contig00000045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000045
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266...   149   1e-33
ref|XP_002531622.1| conserved hypothetical protein [Ricinus comm...   146   9e-33
gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasilie...   146   1e-32
gb|ABW74476.1| unknown [Paeonia suffruticosa]                         146   1e-32
gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasilie...   145   2e-32

>ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera]
           gi|297737814|emb|CBI27015.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  149 bits (377), Expect = 1e-33
 Identities = 87/179 (48%), Positives = 110/179 (61%), Gaps = 5/179 (2%)
 Frame = +1

Query: 133 QNALAAACEEMKXXXXXXXXXXDRRDFVVCPKPRRL-VLNHSMNDPIRTLRWQLSHQVEV 309
           Q    AACEEM+          +RR  VVCPKPRRL +LN ++ DP+R +RW LS+Q E+
Sbjct: 3   QYCALAACEEMRRSVPAS----ERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTEL 58

Query: 310 NESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDARFGEEKXX 489
           ++SK+G DL+++IL+KGG GAE  + T VA            R  NPLIQDARFG+EK  
Sbjct: 59  SDSKSGTDLLDIILAKGGYGAE--SCTQVASSPPFFSGSPPSRVANPLIQDARFGDEKLN 116

Query: 490 XXXXXXXXXXXXXXXXTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 654
                            +    + GC+RA FG+ P AVRIEGFDCLDRDRRNCSIPA+A
Sbjct: 117 PISPPLVSVPSGLSSSPSSSARKGGCIRANFGNNP-AVRIEGFDCLDRDRRNCSIPALA 174


>ref|XP_002531622.1| conserved hypothetical protein [Ricinus communis]
           gi|223528740|gb|EEF30750.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  146 bits (369), Expect = 9e-33
 Identities = 93/193 (48%), Positives = 115/193 (59%), Gaps = 12/193 (6%)
 Frame = +1

Query: 112 MTQCVYQQNALAAACEEMKXXXXXXXXXXDRRDFVVCPKPRRLVL-NHSMND-PIRTLRW 285
           M QC  Q +A +   EE++          +RRD VVCPKPRR  L N S+ND P+R+LRW
Sbjct: 1   MKQCAIQTSAFSTR-EEIRSSVSGTMS--ERRDPVVCPKPRRFGLFNASVNDHPVRSLRW 57

Query: 286 QLSHQVEVNESKAGVDLMELILSKGG-NGAEQSAATHVA-XXXXXXXXXXXXRATNPLIQ 459
            LSHQ E+ ESKAG DL+++IL+KGG  G EQ + T VA             R  NPLIQ
Sbjct: 58  HLSHQTEICESKAGNDLLDIILTKGGCYGVEQQSCTQVASSPPPFFCGSPPSRVANPLIQ 117

Query: 460 DARFGEEKXXXXXXXXXXXXXXXXXXTT--------RKGCVRAKFGHKPAAVRIEGFDCL 615
           DARFGEE+                  ++        + GCVRA FG+KP AVR+EGFDCL
Sbjct: 118 DARFGEEELSPISPLMPMPIQPPSSSSSSSPTSSGRKGGCVRANFGNKP-AVRVEGFDCL 176

Query: 616 DRDRRNCSIPAVA 654
           DRDRR+CSIPA+A
Sbjct: 177 DRDRRSCSIPALA 189


>gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasiliensis]
          Length = 176

 Score =  146 bits (368), Expect = 1e-32
 Identities = 86/182 (47%), Positives = 111/182 (60%), Gaps = 1/182 (0%)
 Frame = +1

Query: 112 MTQCVYQQNALAAACEEMKXXXXXXXXXXDRRDFVVCPKPRRLVLNHSMNDPIRTLRWQL 291
           M Q    +NA+A+ C++ +          D +  VVCPKPRR+ +    N+P R LRW +
Sbjct: 1   MNQFNLHKNAIAS-CDQTETRGLVSIF--DSKGPVVCPKPRRVGI--LANNPSRPLRWHM 55

Query: 292 SHQVEVNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDARF 471
           SHQ E+ +SKAG +L+++IL K G+G EQSA  HVA            RA NP+IQDARF
Sbjct: 56  SHQAEMCDSKAGAELLDIILMKDGHGTEQSA-NHVASPLPFFCGSPPTRAANPVIQDARF 114

Query: 472 GEEKXXXXXXXXXXXXXXXXXXTTRKG-CVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPA 648
           G+EK                  T+RKG CVR KFG KPAAVR+EGFDCL+RDR+N SIPA
Sbjct: 115 GDEKLTPVSPLLIPSPSSLSSPTSRKGGCVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPA 174

Query: 649 VA 654
           +A
Sbjct: 175 MA 176


>gb|ABW74476.1| unknown [Paeonia suffruticosa]
          Length = 183

 Score =  146 bits (368), Expect = 1e-32
 Identities = 87/187 (46%), Positives = 110/187 (58%), Gaps = 6/187 (3%)
 Frame = +1

Query: 112 MTQCVYQQNALAAACEEMKXXXXXXXXXXDRRDFVVCPKPRRL-VLNHSMNDPIRTLRWQ 288
           M  C  QQ  + AA EEM+          DRRD VVCPKPRR+ +L+ +++DPIR LRW 
Sbjct: 1   MNHCAIQQQNVYAAREEMRSPVSIPMS--DRRDSVVCPKPRRMGLLDSTISDPIRPLRWH 58

Query: 289 LSH-QVEVNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDA 465
           LSH Q E ++S+AG DL+++ILSKGG   EQS    +A            R  NP++ DA
Sbjct: 59  LSHHQSEYSDSRAGTDLLDIILSKGGYSVEQSG-NQLASSPPFFSGSPPSRVANPVVLDA 117

Query: 466 RFGEEKXXXXXXXXXXXXXXXXXXTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRRN 633
           RFG+EK                   +    + GC+RA +G KP  VRIEGFDCLDRDRRN
Sbjct: 118 RFGDEKITPSAPLQPLLSPGPSSSPSSSARKGGCLRANYGSKPV-VRIEGFDCLDRDRRN 176

Query: 634 CSIPAVA 654
           CSIPA+A
Sbjct: 177 CSIPALA 183


>gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasiliensis]
          Length = 176

 Score =  145 bits (366), Expect = 2e-32
 Identities = 80/153 (52%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
 Frame = +1

Query: 199 DRRDFVVCPKPRRLVLNHSMNDPIRTLRWQLSHQVEVNESKAGVDLMELILSKGGNGAEQ 378
           D +  VVCPKPRR+ +    N+P R LRW +SHQ E+ +SKAG +L+++IL K G+G EQ
Sbjct: 27  DSKGPVVCPKPRRVGI--LANNPSRPLRWHMSHQAEMCDSKAGAELLDIILMKDGHGTEQ 84

Query: 379 SAATHVAXXXXXXXXXXXXRATNPLIQDARFGEEKXXXXXXXXXXXXXXXXXXTTRKG-C 555
           SA  HVA            RA NP+IQDARFG+EK                  T+RKG C
Sbjct: 85  SA-NHVASPLPFFCGSPPTRAANPVIQDARFGDEKLTPVSPLLIPSPSSLSSPTSRKGGC 143

Query: 556 VRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 654
           VR KFG KPAAVR+EGFDCL+RDR+N SIPA+A
Sbjct: 144 VRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 176


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