BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000028
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329431.1| predicted protein [Populus trichocarpa] gi|1...   394   e-107
gb|ACJ85054.1| unknown [Medicago truncatula]                          390   e-106
gb|AFK39593.1| unknown [Lotus japonicus]                              390   e-106
ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus comm...   390   e-106
ref|XP_003548576.1| PREDICTED: 60S ribosomal protein L5-like [Gl...   389   e-106

>ref|XP_002329431.1| predicted protein [Populus trichocarpa] gi|118486443|gb|ABK95061.1|
           unknown [Populus trichocarpa]
           gi|222870481|gb|EEF07612.1| predicted protein [Populus
           trichocarpa]
          Length = 297

 Score =  394 bits (1013), Expect = e-107
 Identities = 202/285 (70%), Positives = 220/285 (77%)
 Frame = -2

Query: 855 MVFIKPTKSRAYFKRYQVKFRRRRAGKTDYRARIRLINXXXXXXXXXXXXXXXXXXXXXX 676
           M F K  KSRAYFKRYQVKF+RRRAGKTDYRARIRLIN                      
Sbjct: 1   MAFAKAQKSRAYFKRYQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTN--- 57

Query: 675 XXXXXXXXXXXXXXXXKDIIAQIVSASIAGDMILTSAYAHELPRYGLDVGLTNYSAAYCT 496
                           KDIIAQI SASIAGD++L SAYAHELPRYGL+ GLTNY+AAYCT
Sbjct: 58  ----------------KDIIAQIASASIAGDIVLASAYAHELPRYGLEAGLTNYAAAYCT 101

Query: 495 GLLLARRVLKTLEMDEEYEGNVEATGEDFSVEPTDTRRPFRALLDVGLIRTTTGNRVFXX 316
           GLLLARRVLK LEMD+EYEGNVEATGEDFSVEP D+RRPFRALLDVGL+RTTTGNRVF  
Sbjct: 102 GLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPADSRRPFRALLDVGLLRTTTGNRVFGA 161

Query: 315 XXXXXXXXXDIPHSDKRFAGFKKDEKQLDAEVHRKYVYGGHVAAYMRTLIEDEPEKYQTH 136
                    DIPHSDKRFAGF KD KQLDAEVHRKY+YGGHVAAYMRTL+EDEPEKYQ+H
Sbjct: 162 LKGALDGGLDIPHSDKRFAGFAKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSH 221

Query: 135 FSEYIKKGIEADGIEELYRKVHAGIRADPTPKKSEKEAPKAHKRF 1
           FSEY+K+GI+ADG+E LY+KVHA IRADPT KKSEK+ PK HKR+
Sbjct: 222 FSEYLKRGIDADGMEALYKKVHAAIRADPTAKKSEKQPPKEHKRY 266


>gb|ACJ85054.1| unknown [Medicago truncatula]
          Length = 302

 Score =  390 bits (1003), Expect = e-106
 Identities = 197/285 (69%), Positives = 224/285 (78%)
 Frame = -2

Query: 855 MVFIKPTKSRAYFKRYQVKFRRRRAGKTDYRARIRLINXXXXXXXXXXXXXXXXXXXXXX 676
           MV++K  KS+AYFKRYQVKF+RRR GKTDYRARIRLIN                      
Sbjct: 1   MVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTN--- 57

Query: 675 XXXXXXXXXXXXXXXXKDIIAQIVSASIAGDMILTSAYAHELPRYGLDVGLTNYSAAYCT 496
                           KDI+AQIVSASIAGD++L +AY+HELP +GL VGLTNY+AAYCT
Sbjct: 58  ----------------KDIVAQIVSASIAGDIVLAAAYSHELPHFGLKVGLTNYAAAYCT 101

Query: 495 GLLLARRVLKTLEMDEEYEGNVEATGEDFSVEPTDTRRPFRALLDVGLIRTTTGNRVFXX 316
           GLLLARRVLKTLEMDEEYEGNVEATGED+SVEP ++RRPFRALLDVGL++TTTGNRVF  
Sbjct: 102 GLLLARRVLKTLEMDEEYEGNVEATGEDYSVEPAESRRPFRALLDVGLVKTTTGNRVFGA 161

Query: 315 XXXXXXXXXDIPHSDKRFAGFKKDEKQLDAEVHRKYVYGGHVAAYMRTLIEDEPEKYQTH 136
                    DIPHSDKRFAGF K++K+LDAEVHRKY++GGHV+AYM+TLIEDEPEKYQTH
Sbjct: 162 LKGALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVSAYMKTLIEDEPEKYQTH 221

Query: 135 FSEYIKKGIEADGIEELYRKVHAGIRADPTPKKSEKEAPKAHKRF 1
           FSEYIKKGIEADG+EELY+KVHA IRADPT KKSEK+ PK HKR+
Sbjct: 222 FSEYIKKGIEADGLEELYKKVHAAIRADPTIKKSEKQPPKQHKRY 266


>gb|AFK39593.1| unknown [Lotus japonicus]
          Length = 301

 Score =  390 bits (1001), Expect = e-106
 Identities = 199/285 (69%), Positives = 223/285 (78%)
 Frame = -2

Query: 855 MVFIKPTKSRAYFKRYQVKFRRRRAGKTDYRARIRLINXXXXXXXXXXXXXXXXXXXXXX 676
           MVFIK  K RAYFKR+QVKF+RRR GKTDYRARIRLIN                      
Sbjct: 1   MVFIKAQKPRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTAKYRFVVRSTN--- 57

Query: 675 XXXXXXXXXXXXXXXXKDIIAQIVSASIAGDMILTSAYAHELPRYGLDVGLTNYSAAYCT 496
                           KDIIAQI+S++IAGD++L +AY+HELPRYGL+VGLTNY+AAYCT
Sbjct: 58  ----------------KDIIAQIISSTIAGDIVLAAAYSHELPRYGLEVGLTNYAAAYCT 101

Query: 495 GLLLARRVLKTLEMDEEYEGNVEATGEDFSVEPTDTRRPFRALLDVGLIRTTTGNRVFXX 316
           GLLLARRVLKTLEMDEEYEGNVEATGED+SVEP +TR PFRALLDVGLI+TTTGNRVF  
Sbjct: 102 GLLLARRVLKTLEMDEEYEGNVEATGEDYSVEPAETRGPFRALLDVGLIKTTTGNRVFGA 161

Query: 315 XXXXXXXXXDIPHSDKRFAGFKKDEKQLDAEVHRKYVYGGHVAAYMRTLIEDEPEKYQTH 136
                    DIPHSDKRFAGF K++K+LDAEVHRKYV+GGHVAAYM+TLIEDEPEKYQ+H
Sbjct: 162 LKGALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYVFGGHVAAYMKTLIEDEPEKYQSH 221

Query: 135 FSEYIKKGIEADGIEELYRKVHAGIRADPTPKKSEKEAPKAHKRF 1
           FSEYIK+GIEADG+EELY+KVHA IRADPT KKSEK  PK HKR+
Sbjct: 222 FSEYIKRGIEADGLEELYKKVHAAIRADPTSKKSEKPQPKEHKRY 266


>ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus communis]
           gi|223535822|gb|EEF37483.1| ribosomal protein L5,
           putative [Ricinus communis]
          Length = 299

 Score =  390 bits (1001), Expect = e-106
 Identities = 198/285 (69%), Positives = 219/285 (76%)
 Frame = -2

Query: 855 MVFIKPTKSRAYFKRYQVKFRRRRAGKTDYRARIRLINXXXXXXXXXXXXXXXXXXXXXX 676
           M F+K  K++AYFKRYQVKF+RRRAGKTDYRARIRLIN                      
Sbjct: 1   MAFVKAQKTKAYFKRYQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTN--- 57

Query: 675 XXXXXXXXXXXXXXXXKDIIAQIVSASIAGDMILTSAYAHELPRYGLDVGLTNYSAAYCT 496
                           KDI+AQIVSASIAGD++L +AYAHELP YGLDVGLTNY+AAYCT
Sbjct: 58  ----------------KDIVAQIVSASIAGDIVLAAAYAHELPHYGLDVGLTNYAAAYCT 101

Query: 495 GLLLARRVLKTLEMDEEYEGNVEATGEDFSVEPTDTRRPFRALLDVGLIRTTTGNRVFXX 316
           GLLLARR LK LEMDEEY+GNVEATGEDFSVEP DTRRPFRALLDVGLIRTTTGNRVF  
Sbjct: 102 GLLLARRTLKMLEMDEEYQGNVEATGEDFSVEPADTRRPFRALLDVGLIRTTTGNRVFGA 161

Query: 315 XXXXXXXXXDIPHSDKRFAGFKKDEKQLDAEVHRKYVYGGHVAAYMRTLIEDEPEKYQTH 136
                    DIPHS+KRFAGF KD KQLD+EVHRKY+YGGHVAAYM TL+EDEPEKYQ+H
Sbjct: 162 LKGALDGGLDIPHSEKRFAGFSKDGKQLDSEVHRKYIYGGHVAAYMNTLMEDEPEKYQSH 221

Query: 135 FSEYIKKGIEADGIEELYRKVHAGIRADPTPKKSEKEAPKAHKRF 1
           FS+YIK G+EAD IE LY+KVHA IRADP+PKKSEK+ PK HKR+
Sbjct: 222 FSKYIKSGVEADDIEALYKKVHAAIRADPSPKKSEKQPPKEHKRY 266


>ref|XP_003548576.1| PREDICTED: 60S ribosomal protein L5-like [Glycine max]
          Length = 298

 Score =  389 bits (999), Expect = e-106
 Identities = 198/285 (69%), Positives = 223/285 (78%)
 Frame = -2

Query: 855 MVFIKPTKSRAYFKRYQVKFRRRRAGKTDYRARIRLINXXXXXXXXXXXXXXXXXXXXXX 676
           MV++K  KS+AYFKRYQVKF+RRR GKTDYRARIRLIN                      
Sbjct: 1   MVYVKSQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSN--- 57

Query: 675 XXXXXXXXXXXXXXXXKDIIAQIVSASIAGDMILTSAYAHELPRYGLDVGLTNYSAAYCT 496
                           KDI+AQI+SASIAGD++L +AYAHELPRYGL+VGLTNY+AAYCT
Sbjct: 58  ----------------KDIVAQIISASIAGDIVLAAAYAHELPRYGLEVGLTNYAAAYCT 101

Query: 495 GLLLARRVLKTLEMDEEYEGNVEATGEDFSVEPTDTRRPFRALLDVGLIRTTTGNRVFXX 316
           GLLLARRVLKTLEMDEEYEGNVEATGED+SVEP ++RRPFRALLDVGLIRTTTGNRVF  
Sbjct: 102 GLLLARRVLKTLEMDEEYEGNVEATGEDYSVEPAESRRPFRALLDVGLIRTTTGNRVFGA 161

Query: 315 XXXXXXXXXDIPHSDKRFAGFKKDEKQLDAEVHRKYVYGGHVAAYMRTLIEDEPEKYQTH 136
                    DIPHSDKRFAGF K++K+LDAEVHRKYV+GGHVAAYM+ L EDEPEKYQ+H
Sbjct: 162 LKGALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYVFGGHVAAYMKILAEDEPEKYQSH 221

Query: 135 FSEYIKKGIEADGIEELYRKVHAGIRADPTPKKSEKEAPKAHKRF 1
           FSEYIK+GIEADGIE LY+KVHA IRADP+ KKSEK+ PK HKR+
Sbjct: 222 FSEYIKRGIEADGIEALYKKVHAAIRADPSLKKSEKQPPKEHKRY 266