BLASTX nr result
ID: Coptis23_contig00000020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000020
(1322 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271868.1| PREDICTED: uncharacterized protein LOC100243... 280 8e-73
ref|XP_002308255.1| predicted protein [Populus trichocarpa] gi|2... 265 3e-68
emb|CBI18032.3| unnamed protein product [Vitis vinifera] 253 8e-65
gb|AFK48380.1| unknown [Medicago truncatula] 249 1e-63
ref|XP_003623630.1| hypothetical protein MTR_7g073340 [Medicago ... 249 1e-63
>ref|XP_002271868.1| PREDICTED: uncharacterized protein LOC100243025 [Vitis vinifera]
Length = 339
Score = 280 bits (715), Expect = 8e-73
Identities = 166/338 (49%), Positives = 212/338 (62%), Gaps = 22/338 (6%)
Frame = +3
Query: 114 LTRISMALSQQPHSTPSLGFELI---HRPQNQKISVIHFS-------------VSPKAR- 242
L IS++ S P+ +P+ G L + P +Q S + F+ VS AR
Sbjct: 5 LESISLS-SPNPNPSPTTGSPLRITPYHPSSQSSSSLRFASLLGPRPRSRPHGVSAVART 63
Query: 243 ----GLSLSLINL-RNCSRNRQFLSFAASHEDSXXXXXXXXXXXXXXXXXXXXTQEEWEK 407
GL L+ L R S NR L+ AAS EDS ++EEW+K
Sbjct: 64 LSPIGLGHGLVPLTRRTSCNRLVLASAASREDSSKIEVEKENTNVGAGAEA--SEEEWQK 121
Query: 408 MLESFKEQTIKMQGMSKEAYEVYSKKAAVILEEASKKLKTQAEKTSYDLXXXXXXXXXXX 587
L S KEQ +KMQ +S+EAYE+YS++A VIL E SK+LK QA+K S DL
Sbjct: 122 TLASLKEQALKMQSVSQEAYEIYSERAKVILIETSKQLKAQADKASQDLNELAKVIGEDG 181
Query: 588 XXYLAEAAKNSPEEMKDIVETLASSTDELKDVSRVRDFYFGIPYGAILTIGGFLSFMITG 767
YL+ AA+NSP +KD+VET S +D+L +S+VRDFY GIPYG L++GG LSFM+TG
Sbjct: 182 KEYLSLAAENSPVPLKDVVETFTSPSDDLDKISKVRDFYLGIPYGVALSVGGLLSFMLTG 241
Query: 768 STSSIRFGVILGGTLLALSVSSLRSWKKGESSDLALKGQTAISSVLFLRELSLVTQSPSF 947
S ++RFGVILGG LLALS+SSLR+WKKGES LALKGQTAI+ ++FLRE+ L++Q PSF
Sbjct: 242 SIPAVRFGVILGGALLALSISSLRAWKKGESLALALKGQTAIAGIIFLREICLLSQKPSF 301
Query: 948 PKFITTLISGAMVAFYLYRIMFDGDKSKGQNLESGSES 1061
+ T+ISGAMVAFYLYRIM DGD KG N E G E+
Sbjct: 302 STRLATIISGAMVAFYLYRIMLDGDLIKGSNGEDGKEN 339
>ref|XP_002308255.1| predicted protein [Populus trichocarpa] gi|222854231|gb|EEE91778.1|
predicted protein [Populus trichocarpa]
Length = 331
Score = 265 bits (676), Expect = 3e-68
Identities = 150/302 (49%), Positives = 202/302 (66%), Gaps = 2/302 (0%)
Frame = +3
Query: 159 PSLGFE-LIHRPQNQKISVIHFSVSPKARGLSLSLINLRNCSRNRQFLSFAASHEDSXXX 335
PSL F+ L+ +P ++S S + +GLS+ ++ S NR ++FAASHEDS
Sbjct: 33 PSLKFKSLLLKPSGHRLS-FESSRAFVPKGLSVGFLS--GNSLNRPIVAFAASHEDSHSK 89
Query: 336 XXXXXXXXXXXXXXXXXTQEEWEKMLESFKEQTIKMQGMSKEAYEVYSKKAAVILEEASK 515
++E W++ LESFKEQ +K+Q +S+EAYE+YSKK V+L+E S+
Sbjct: 90 IEVEKESEDRKLGGEE-SEEVWKQTLESFKEQALKLQSVSQEAYEIYSKKTMVVLQETSE 148
Query: 516 KLKTQAEKTSYDLXXXXXXXXXXXXXYLAEAAKNSPEEMKDIVETLASSTDELKDVSRVR 695
KLK QAEK DL L A +NSPE +K++VETL SSTD L DVS+VR
Sbjct: 149 KLKIQAEKAKSDLGELAKEFGEDGIQLLTVATENSPESVKEVVETLTSSTDNLNDVSKVR 208
Query: 696 DFYFGIPYGAILTIGGFLSFMITGSTSSIRFGVILGGTLLALSVSSLRSWKKGESSDLAL 875
DF+ GIPYG +L+ GFLSFM++GS SS+RFGVILGG LLALSVSSL+S+K+ E LAL
Sbjct: 209 DFHLGIPYGLLLSTAGFLSFMLSGSISSLRFGVILGGMLLALSVSSLKSYKRAEPYSLAL 268
Query: 876 KGQTAISSVLFLRELSLV-TQSPSFPKFITTLISGAMVAFYLYRIMFDGDKSKGQNLESG 1052
KGQ AI++++FLR++S++ T+ SF + TLISGAM AFYLY+I DG +SKG +L G
Sbjct: 269 KGQAAIAAIIFLRDISIILTRRTSFLTPLATLISGAMAAFYLYKIALDGKQSKGSDLGHG 328
Query: 1053 SE 1058
+E
Sbjct: 329 AE 330
>emb|CBI18032.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 253 bits (646), Expect = 8e-65
Identities = 152/316 (48%), Positives = 197/316 (62%), Gaps = 22/316 (6%)
Frame = +3
Query: 114 LTRISMALSQQPHSTPSLGFELI---HRPQNQKISVIHFS-------------VSPKAR- 242
L IS++ S P+ +P+ G L + P +Q S + F+ VS AR
Sbjct: 5 LESISLS-SPNPNPSPTTGSPLRITPYHPSSQSSSSLRFASLLGPRPRSRPHGVSAVART 63
Query: 243 ----GLSLSLINL-RNCSRNRQFLSFAASHEDSXXXXXXXXXXXXXXXXXXXXTQEEWEK 407
GL L+ L R S NR L+ AAS EDS ++EEW+K
Sbjct: 64 LSPIGLGHGLVPLTRRTSCNRLVLASAASREDSSKIEVEKENTNVGAGAEA--SEEEWQK 121
Query: 408 MLESFKEQTIKMQGMSKEAYEVYSKKAAVILEEASKKLKTQAEKTSYDLXXXXXXXXXXX 587
L S KEQ +KMQ +S+EAYE+YS++A VIL E SK+LK QA+K S DL
Sbjct: 122 TLASLKEQALKMQSVSQEAYEIYSERAKVILIETSKQLKAQADKASQDLNELAKVIGEDG 181
Query: 588 XXYLAEAAKNSPEEMKDIVETLASSTDELKDVSRVRDFYFGIPYGAILTIGGFLSFMITG 767
YL+ AA+NSP +KD+VET S +D+L +S+VRDFY GIPYG L++GG LSFM+TG
Sbjct: 182 KEYLSLAAENSPVPLKDVVETFTSPSDDLDKISKVRDFYLGIPYGVALSVGGLLSFMLTG 241
Query: 768 STSSIRFGVILGGTLLALSVSSLRSWKKGESSDLALKGQTAISSVLFLRELSLVTQSPSF 947
S ++RFGVILGG LLALS+SSLR+WKKGES LALKGQTAI+ ++FLRE+ L++Q PSF
Sbjct: 242 SIPAVRFGVILGGALLALSISSLRAWKKGESLALALKGQTAIAGIIFLREICLLSQKPSF 301
Query: 948 PKFITTLISGAMVAFY 995
+ T+ISGAMVAFY
Sbjct: 302 STRLATIISGAMVAFY 317
>gb|AFK48380.1| unknown [Medicago truncatula]
Length = 310
Score = 249 bits (635), Expect = 1e-63
Identities = 142/315 (45%), Positives = 196/315 (62%)
Frame = +3
Query: 102 INPNLTRISMALSQQPHSTPSLGFELIHRPQNQKISVIHFSVSPKARGLSLSLINLRNCS 281
+NP L+ LS P+ P L HR K+S+ ++++ + + L+L
Sbjct: 14 LNPKLSLNHTHLSHSPNFHPLLK----HRHTTFKLSLPRYALNQRTKPLTLV-------- 61
Query: 282 RNRQFLSFAASHEDSXXXXXXXXXXXXXXXXXXXXTQEEWEKMLESFKEQTIKMQGMSKE 461
FAAS +QE W++ L++FKEQ +K+QG+S+E
Sbjct: 62 -------FAASTPQHDSDHGEIEVEKGNDVSSEEESQEAWKQALDTFKEQALKLQGVSQE 114
Query: 462 AYEVYSKKAAVILEEASKKLKTQAEKTSYDLXXXXXXXXXXXXXYLAEAAKNSPEEMKDI 641
AYEVYSKKA V+L++ S++LK QA+K +DL Y + AA+NSPE +K+I
Sbjct: 115 AYEVYSKKAIVVLQDTSEQLKIQADKARHDLSVVAKEITEEGKEYFSSAAENSPE-VKEI 173
Query: 642 VETLASSTDELKDVSRVRDFYFGIPYGAILTIGGFLSFMITGSTSSIRFGVILGGTLLAL 821
VET S D+L VS VRDFY GIPYG +L+ GGFLSFMITGS ++IRFGVILGG LLAL
Sbjct: 174 VETFTSPDDDLSKVSGVRDFYVGIPYGLLLSAGGFLSFMITGSIAAIRFGVILGGVLLAL 233
Query: 822 SVSSLRSWKKGESSDLALKGQTAISSVLFLRELSLVTQSPSFPKFITTLISGAMVAFYLY 1001
S+SSL+S+KKG+ S LALKGQTAI+ +LFLRE+S++ + + + T LISGA+ AFY+Y
Sbjct: 234 SISSLKSYKKGQPSSLALKGQTAIAGILFLREISVLGRGST---YFTALISGAVAAFYVY 290
Query: 1002 RIMFDGDKSKGQNLE 1046
R++ +G KG N E
Sbjct: 291 RLVLEGKPQKGSNFE 305
>ref|XP_003623630.1| hypothetical protein MTR_7g073340 [Medicago truncatula]
gi|355498645|gb|AES79848.1| hypothetical protein
MTR_7g073340 [Medicago truncatula]
Length = 308
Score = 249 bits (635), Expect = 1e-63
Identities = 142/315 (45%), Positives = 196/315 (62%)
Frame = +3
Query: 102 INPNLTRISMALSQQPHSTPSLGFELIHRPQNQKISVIHFSVSPKARGLSLSLINLRNCS 281
+NP L+ LS P+ P L HR K+S+ ++++ + + L+L
Sbjct: 14 LNPKLSLNHTHLSHSPNFHPLLK----HRHTTFKLSLPRYALNQRTKPLTLV-------- 61
Query: 282 RNRQFLSFAASHEDSXXXXXXXXXXXXXXXXXXXXTQEEWEKMLESFKEQTIKMQGMSKE 461
FAAS +QE W++ L++FKEQ +K+QG+S+E
Sbjct: 62 -------FAASTPQHDSDHGEIEVEKGNDVSSEEESQEAWKQALDTFKEQALKLQGVSQE 114
Query: 462 AYEVYSKKAAVILEEASKKLKTQAEKTSYDLXXXXXXXXXXXXXYLAEAAKNSPEEMKDI 641
AYEVYSKKA V+L++ S++LK QA+K +DL Y + AA+NSPE +K+I
Sbjct: 115 AYEVYSKKAIVVLQDTSEQLKIQADKARHDLSVVAKEITEEGKEYFSSAAENSPE-VKEI 173
Query: 642 VETLASSTDELKDVSRVRDFYFGIPYGAILTIGGFLSFMITGSTSSIRFGVILGGTLLAL 821
VET S D+L VS VRDFY GIPYG +L+ GGFLSFMITGS ++IRFGVILGG LLAL
Sbjct: 174 VETFTSPDDDLSKVSGVRDFYVGIPYGLLLSAGGFLSFMITGSIAAIRFGVILGGVLLAL 233
Query: 822 SVSSLRSWKKGESSDLALKGQTAISSVLFLRELSLVTQSPSFPKFITTLISGAMVAFYLY 1001
S+SSL+S+KKG+ S LALKGQTAI+ +LFLRE+S++ + + + T LISGA+ AFY+Y
Sbjct: 234 SISSLKSYKKGQPSSLALKGQTAIAGILFLREISVLGRGST---YFTALISGAVAAFYVY 290
Query: 1002 RIMFDGDKSKGQNLE 1046
R++ +G KG N E
Sbjct: 291 RLVLEGKPQKGSNFE 305