BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041361
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group] g...    75   7e-12
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi...    75   7e-12

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/75 (62%), Positives = 59/75 (78%)
 Frame = -3

Query: 226 LQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSLYASCGCVWDSV 47
           L+PDSFV+A+VLRAC +V+ LSYGR +H  V+K   VVDS+VENALVS+Y SCG + D+ 
Sbjct: 117 LRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAA 176

Query: 46  RVFNGIARPDLVSWS 2
            VF GI +PDLV WS
Sbjct: 177 VVFGGIDKPDLVGWS 191



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/75 (34%), Positives = 49/75 (65%)
 Frame = -3

Query: 226 LQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSLYASCGCVWDSV 47
           ++PD+F +++VL AC+ ++   +G + HC ++K+      Y+EN+L+  YA CG +    
Sbjct: 218 IEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMR 277

Query: 46  RVFNGIARPDLVSWS 2
           RVF+ ++  +LVSW+
Sbjct: 278 RVFSHMSEKNLVSWN 292


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/75 (62%), Positives = 59/75 (78%)
 Frame = -3

Query: 226 LQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSLYASCGCVWDSV 47
           L+PDSFV+A+VLRAC +V+ LSYGR +H  V+K   VVDS+VENALVS+Y SCG + D+ 
Sbjct: 58  LRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAA 117

Query: 46  RVFNGIARPDLVSWS 2
            VF GI +PDLV WS
Sbjct: 118 VVFGGIDKPDLVGWS 132



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/75 (34%), Positives = 49/75 (65%)
 Frame = -3

Query: 226 LQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSLYASCGCVWDSV 47
           ++PD+F +++VL AC+ ++   +G + HC ++K+      Y+EN+L+  YA CG +    
Sbjct: 159 IEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMR 218

Query: 46  RVFNGIARPDLVSWS 2
           RVF+ ++  +LVSW+
Sbjct: 219 RVFSHMSEKNLVSWN 233



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 DSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSLYASCGCVWDSV-RV 41
           D F+   +L+ CS+  +L  G+  H  ++K+D   DSYV ++L+ +Y+ CG +W++  RV
Sbjct: 338 DEFIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCG-IWEAAKRV 396

Query: 40  FNGIARPDLVSWS 2
           F  + +PD   WS
Sbjct: 397 FTRVEQPDTAPWS 409


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226 LQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGV-VDSYVENALVSLYASCGCVWDS 50
           L+PD FV+++ LRAC+ + +  +GR+LHC   K+  V  D +V N L+++YASC  +  +
Sbjct: 102 LRPDGFVFSVALRACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYASCRSLGCA 161

Query: 49  VRVFNGIARPDLVSWS 2
            +VFNGIA PDLVSW+
Sbjct: 162 EKVFNGIATPDLVSWT 177



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = -3

Query: 217 DSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSLYASCGCVWDSVRVF 38
           D F+ A  LR+C+   +L+ GR LH  +LK++   D++V ++LV +YA CGC+ +S  +F
Sbjct: 383 DQFIVASSLRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGCLEESHLLF 442

Query: 37  NGIARPDLVSWS 2
           +    P    WS
Sbjct: 443 STTKYPGTAEWS 454


>ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
           gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza
           sativa Japonica Group] gi|125582364|gb|EAZ23295.1|
           hypothetical protein OsJ_06992 [Oryza sativa Japonica
           Group] gi|215696993|dbj|BAG90987.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 PLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGV-VDSYVENALVSLYASCGCVWD 53
           PL+PD+FV+++ LRAC+   +L  GR++H    K+  V  D +V N LV++YASC  +  
Sbjct: 99  PLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGC 158

Query: 52  SVRVFNGIARPDLVSWS 2
           + +VF+GIA PD VSW+
Sbjct: 159 AEKVFSGIAAPDSVSWT 175


>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 PLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGV-VDSYVENALVSLYASCGCVWD 53
           PL+PD+FV+++ LRAC+   +L  GR++H    K+  V  D +V N LV++YASC  +  
Sbjct: 99  PLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGC 158

Query: 52  SVRVFNGIARPDLVSWS 2
           + +VF+GIA PD VSW+
Sbjct: 159 AEKVFSGIAAPDSVSWT 175