BLASTX nr result
ID: Coptis21_contig00041117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00041117
(568 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 280 1e-73
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 248 6e-64
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi... 233 1e-59
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2... 233 1e-59
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 212 4e-53
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 280 bits (716), Expect = 1e-73
Identities = 129/188 (68%), Positives = 158/188 (84%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+DKAQ I +FMRRNGCEPDLVTYN+LLNYCCDEL+LE+AE LM KMERSG++PD YSYN+
Sbjct: 235 IDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNE 294
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
LLKGLCKA RL+KAY++MV KME + LCDVVS+NT+I ALC ASHTKRAY+LFEEM GKG
Sbjct: 295 LLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKG 354
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
I D VT+T+LI F EG +++A+ L DQM + L+PDRV+YTT+VDHLCKTG++ +A
Sbjct: 355 ITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAH 414
Query: 543 KFFLDMIE 566
F DM+E
Sbjct: 415 SVFCDMVE 422
Score = 94.7 bits (234), Expect = 9e-18
Identities = 59/188 (31%), Positives = 89/188 (47%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+D A + M G EPD+VTY I++N C + A ++ M R G PD +
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
L+ GLC +++ AY L VG M R +N+LI C+A +A + M G
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
D VTY VL+N E + AE+L +M + PD Y ++ LCK R++ A
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAY 309
Query: 543 KFFLDMIE 566
++ +E
Sbjct: 310 MMMVNKME 317
Score = 89.7 bits (221), Expect = 3e-16
Identities = 53/158 (33%), Positives = 80/158 (50%)
Frame = +3
Query: 33 MRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARR 212
M G PD+VT+ IL+ E A+KL+D+M GL PD Y ++ LCK +
Sbjct: 350 MGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGK 409
Query: 213 LNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTV 392
+ A+ + +E DVVS+N LI LC+AS A L+E+M G D VT+ +
Sbjct: 410 MGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKL 469
Query: 393 LINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVD 506
+I E + +A ++DQM+ D V T+V+
Sbjct: 470 IIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVN 507
Score = 77.4 bits (189), Expect = 1e-12
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 2/177 (1%)
Frame = +3
Query: 15 QVIKAF--MRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLL 188
Q +K F M ++ C + YN + + + AE+ D+M G +S++Y++ +
Sbjct: 27 QALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFI 86
Query: 189 KGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIV 368
GLCK + L+ + + D+ ++N + LC + A + + M KG
Sbjct: 87 SGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGRE 146
Query: 369 ADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELA 539
D VTYT++IN GR D A +++ M+ PD +V LC G+++LA
Sbjct: 147 PDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLA 203
Score = 69.3 bits (168), Expect = 4e-10
Identities = 43/159 (27%), Positives = 77/159 (48%)
Frame = +3
Query: 66 TYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARRLNKAYLLMVGK 245
TY+ ++ C EKL++ M+R G PD ++YN L LC +L+ A ++
Sbjct: 81 TYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTM 140
Query: 246 MEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTVLINTFFGEGRA 425
+E D+V++ +I LC+A A E++ M KG D L+ +G+
Sbjct: 141 VEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKV 200
Query: 426 DLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
DLA +L + + + +Y ++++ C+ G I+ AQ
Sbjct: 201 DLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQ 239
Score = 65.1 bits (157), Expect = 8e-09
Identities = 38/153 (24%), Positives = 72/153 (47%)
Frame = +3
Query: 105 MLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFN 284
+++ A K D+M +S + S YN+ + L + R + A + + +++
Sbjct: 24 LIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYS 83
Query: 285 TLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTVLINTFFGEGRADLAEDLFDQMLSM 464
I+ LCK + +L E+M G V D Y + +N E + D+A + M+
Sbjct: 84 RFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEK 143
Query: 465 NLIPDRVVYTTMVDHLCKTGRIELAQKFFLDMI 563
PD V YT +++ LC+ GR + A + + +M+
Sbjct: 144 GREPDIVTYTIVINGLCRAGRFDSAVEIWRNMV 176
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 248 bits (632), Expect = 6e-64
Identities = 115/188 (61%), Positives = 143/188 (76%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+DKAQ IK+FMRRNGCEPDLVTYN+ LNY CDELML+DA+KL+ MERSG++PD YSYNQ
Sbjct: 236 IDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQ 295
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
LLKG+CK +KAYLLM KM + LCDVVS+NT+I A CK T AY+LFEEM KG
Sbjct: 296 LLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKG 355
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
I D VT+T+ I F G+G ++A+ L DQM M L PD + YTT++DHLCK+G++E+A
Sbjct: 356 IPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAH 415
Query: 543 KFFLDMIE 566
F DM+E
Sbjct: 416 SIFCDMVE 423
Score = 95.5 bits (236), Expect = 5e-18
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Frame = +3
Query: 6 DKAQVIKAF--MRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYN 179
D K F M + G PD+VT+ I + + A+KL+D+M GL PD Y
Sbjct: 340 DTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYT 399
Query: 180 QLLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGK 359
++ LCK+ ++ A+ + +E DV+SFN LI CK S A L+EEM +
Sbjct: 400 TIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNR 459
Query: 360 GIVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMV 503
G D VTY ++I E + +A ++ QM+ DR + T++
Sbjct: 460 GSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 82.0 bits (201), Expect = 6e-14
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+D A + + +NG +PD+VTY I+++ C + A + M G PD+ +
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189
Query: 183 LLKGLCKARRLNKAYLLMVGKMEM-RSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGK 359
++ GLC R+++ AY L++ M+ R + +N LI+ C+A +A + M
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249
Query: 360 GIVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCK 518
G D VTY V +N F E D A+ L M + PD Y ++ +CK
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302
Score = 68.9 bits (167), Expect = 5e-10
Identities = 44/188 (23%), Positives = 82/188 (43%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+DKA + M ++ C + YN + + + A +M G S++Y++
Sbjct: 25 IDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSR 84
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
+ GLCK + L+ + L D+ +FN + L A E+FE++ G
Sbjct: 85 FITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNG 144
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
D VTYT++I+ + D A + M+ PD +V LC +++LA
Sbjct: 145 RKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAY 204
Query: 543 KFFLDMIE 566
+ +D+++
Sbjct: 205 ELIIDVMK 212
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Frame = +3
Query: 105 MLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARRLNKA--YLLMVGKMEMRSLCDVVS 278
+++ A ++ D+M +S + S YN+ + L R + A Y +G +
Sbjct: 24 LIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFS--LSSFT 81
Query: 279 FNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTVLINTFFGEGRADLAEDLFDQML 458
++ I LCK + EL +M + D + + ++ F EGR DLA ++F++++
Sbjct: 82 YSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIV 141
Query: 459 SMNLIPDRVVYTTMVDHLCKTGRIELAQKFFLDMI 563
PD V YT ++ +CK + + A +F+ DMI
Sbjct: 142 KNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMI 176
>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 233 bits (595), Expect = 1e-59
Identities = 105/188 (55%), Positives = 143/188 (76%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
VDKA IKAFM R GC PDLVTYNILLNYCC+E M+++A +L++ MERSG++PD YSYN+
Sbjct: 240 VDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNE 299
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
LLKG CKA +++A+L+MV +M+ + +CDVVS+NT+I A CKA T++ YELFEEM GKG
Sbjct: 300 LLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKG 359
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
I D VT+ +LI+ F EG + + L D+M M ++PD + YT +VDHLCK G++++A
Sbjct: 360 IRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAH 419
Query: 543 KFFLDMIE 566
F DM+E
Sbjct: 420 SVFRDMVE 427
Score = 86.7 bits (213), Expect = 2e-15
Identities = 48/154 (31%), Positives = 81/154 (52%)
Frame = +3
Query: 45 GCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARRLNKA 224
G PD+VT+NIL++ E +KL+D+M + + PD Y ++ LCK +++ A
Sbjct: 359 GIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVA 418
Query: 225 YLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTVLINT 404
+ + +E DV+S+N L+ CK S A LF+EM KG+ D VTY +++
Sbjct: 419 HSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGG 478
Query: 405 FFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVD 506
+ LA ++DQM+ +R + T+V+
Sbjct: 479 LIRGKKISLACRVWDQMMERGFTLNRHLSETLVN 512
Score = 84.0 bits (206), Expect = 2e-14
Identities = 51/188 (27%), Positives = 89/188 (47%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
VD+A ++ + D+V+YN ++ C +L ++M G++PD ++N
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
L+ + + L+ +MR L D + + ++ LCK A+ +F +M G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
+ D ++Y L+N F R A LFD+M S L PD V Y +V L + +I LA
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489
Query: 543 KFFLDMIE 566
+ + M+E
Sbjct: 490 RVWDQMME 497
Score = 79.7 bits (195), Expect = 3e-13
Identities = 47/165 (28%), Positives = 76/165 (46%)
Frame = +3
Query: 45 GCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARRLNKA 224
G PD+ +N LN C + LE A +L M G PD SY ++ LC A+R ++A
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173
Query: 225 YLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTVLINT 404
+ ++ D + L+ LC AYEL + G+ +++ Y LI+
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDG 233
Query: 405 FFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELA 539
F GR D A + M +PD V Y ++++ C+ G ++ A
Sbjct: 234 FCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEA 278
Score = 68.6 bits (166), Expect = 7e-10
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Frame = +3
Query: 168 YSYNQLLKGLCKARRLNKAYLLMVGKMEMRSLC---DVVSFNTLIAALCKASHTKRAYEL 338
++Y++ + LC A L+ ++M SL D+ +FNT + LC+ + + A EL
Sbjct: 82 FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141
Query: 339 FEEMSGKGIVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCK 518
F M KG D V+YT++I+ R D A ++ +++ L PD +V LC
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 519 TGRIELAQKFFLDMIE 566
GR++LA + + +I+
Sbjct: 202 GGRVDLAYELVVGVIK 217
>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 233 bits (595), Expect = 1e-59
Identities = 107/188 (56%), Positives = 138/188 (73%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+DKA + +FM R GC+PDLVTYN+LLNYCC+E M E+A KL+ KME S ++PD YSYNQ
Sbjct: 236 IDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQ 295
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
LLK CKA +KAYL MV KM + CDVVS+NT+I A C S+ +RAY+LFEEM KG
Sbjct: 296 LLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKG 355
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
I D VT+T+LI F EG +D+A+ L D M M L+PDR+ YTT++DH CK+G++E+A
Sbjct: 356 IAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAH 415
Query: 543 KFFLDMIE 566
F DM+E
Sbjct: 416 SIFCDMVE 423
Score = 86.3 bits (212), Expect = 3e-15
Identities = 50/158 (31%), Positives = 79/158 (50%)
Frame = +3
Query: 33 MRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARR 212
M R G PD+VT+ IL+ E + A+KL+D M GL PD Y ++ CK+ +
Sbjct: 351 MGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGK 410
Query: 213 LNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTV 392
+ A+ + +E DVVS+N LI CK+ L+E+M +G D VTY +
Sbjct: 411 VEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKL 470
Query: 393 LINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVD 506
+I E + A ++DQM+ L DR + +++
Sbjct: 471 IIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLIN 508
Score = 74.3 bits (181), Expect = 1e-11
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Frame = +3
Query: 33 MRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARR 212
M G EPD+VT+ I+++ C + A + M G++PD+ + L GLC +
Sbjct: 140 MVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQ 199
Query: 213 LNKAYLLMVGKMEMR-SLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYT 389
++ AY L++G + S + +N LI+ C+A +A + MS G D VTY
Sbjct: 200 VDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYN 259
Query: 390 VLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQKFFL 554
VL+N E + A L +M + PD Y ++ CK + A F +
Sbjct: 260 VLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMV 314
Score = 65.5 bits (158), Expect = 6e-09
Identities = 42/187 (22%), Positives = 81/187 (43%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+D A + M + C + YN + + A KM G S++Y++
Sbjct: 25 IDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSR 84
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
+ GLC+ + L+ ++ + D+ +FN + L + + + A E+F M +G
Sbjct: 85 FISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERG 144
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
D VT+T++I+ + D A + ML + PD + LC G+++LA
Sbjct: 145 REPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAY 204
Query: 543 KFFLDMI 563
+ + +I
Sbjct: 205 ELIIGVI 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/132 (27%), Positives = 64/132 (48%)
Frame = +3
Query: 6 DKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQL 185
D A+ + M G PD + Y ++++ C +E A + M G+ PD SYN L
Sbjct: 377 DMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNAL 436
Query: 186 LKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGI 365
+ G CK+ R+ + L ++ S D V++ +I AL + + A ++++M +G+
Sbjct: 437 INGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGL 496
Query: 366 VADTVTYTVLIN 401
D +LIN
Sbjct: 497 TLDRGISEMLIN 508
Score = 57.8 bits (138), Expect = 1e-06
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 1/159 (0%)
Frame = +3
Query: 66 TYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARRLNKAYLLMVGK 245
TY+ ++ C + L+ ME+ PD +++N L L + R A +
Sbjct: 81 TYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRM 140
Query: 246 MEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTVLINTFFGEGRA 425
+E DVV+F +I LCK A + + M KGI D L G+
Sbjct: 141 VERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQV 200
Query: 426 DLAEDLFDQMLSMNLIP-DRVVYTTMVDHLCKTGRIELA 539
DLA +L ++S L +VY ++ C+ GRI+ A
Sbjct: 201 DLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKA 239
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 212 bits (539), Expect = 4e-53
Identities = 108/188 (57%), Positives = 132/188 (70%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+ KA IK+FM ++GCEPDL+TYNILLN+ CD LMLE A K M KMER G++PD YSYNQ
Sbjct: 235 ISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQ 294
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
LLKGLCKA RL+KAY LM M + LCD VS+NT+I ALCK+ T++AY LFEEM K
Sbjct: 295 LLKGLCKANRLDKAYKLM-NTMWEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKD 353
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQ 542
+ D T+ LI F EG +A+ L M LIPD + YTT+VD+ CKT +IE+AQ
Sbjct: 354 VAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQ 413
Query: 543 KFFLDMIE 566
F DMIE
Sbjct: 414 GVFRDMIE 421
Score = 92.8 bits (229), Expect = 3e-17
Identities = 55/178 (30%), Positives = 87/178 (48%)
Frame = +3
Query: 33 MRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARR 212
M G EPD+VTY I+++ C + A + M GL PD + L+ GLC +
Sbjct: 140 MVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGK 199
Query: 213 LNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTV 392
++ AY L VG+M+ + + FN+L++ CK+ +A + MS G D +TY +
Sbjct: 200 VDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNI 259
Query: 393 LINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQKFFLDMIE 566
L+N F +LA +M + + PD Y ++ LCK R++ A K M E
Sbjct: 260 LLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWE 317
Score = 73.6 bits (179), Expect = 2e-11
Identities = 47/157 (29%), Positives = 76/157 (48%)
Frame = +3
Query: 33 MRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARR 212
M + PD+ T+ L+ E A+ L+ M ++ L PD Y ++ CK R+
Sbjct: 349 MGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRK 408
Query: 213 LNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTV 392
+ A + +E+ DVVS+N LI LCKAS A L+EEM +G D VT+ +
Sbjct: 409 IEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKL 468
Query: 393 LINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMV 503
+I + LA ++DQM+ D+ + T++
Sbjct: 469 IIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLI 505
Score = 70.1 bits (170), Expect = 2e-10
Identities = 44/179 (24%), Positives = 82/179 (45%)
Frame = +3
Query: 3 VDKAQVIKAFMRRNGCEPDLVTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQ 182
+D+A I M ++ C YN + + AE +M G ++Y++
Sbjct: 25 IDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSR 84
Query: 183 LLKGLCKARRLNKAYLLMVGKMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKG 362
+ LC+ + L+ ++ L D+ +FN + L + + + A + F+EM KG
Sbjct: 85 FISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKG 144
Query: 363 IVADTVTYTVLINTFFGEGRADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELA 539
D VTYT++++ + D A + + M++ L PD T +V LC G+++LA
Sbjct: 145 REPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLA 203
Score = 68.2 bits (165), Expect = 9e-10
Identities = 41/167 (24%), Positives = 77/167 (46%)
Frame = +3
Query: 63 VTYNILLNYCCDELMLEDAEKLMDKMERSGLKPDSYSYNQLLKGLCKARRLNKAYLLMVG 242
+ + + C ++++A ++ D+M +S S YN+ + L R + A
Sbjct: 10 LVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSR 69
Query: 243 KMEMRSLCDVVSFNTLIAALCKASHTKRAYELFEEMSGKGIVADTVTYTVLINTFFGEGR 422
+ +++ I+ALC+ + L E+M G + D + + +N F E
Sbjct: 70 MIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENL 129
Query: 423 ADLAEDLFDQMLSMNLIPDRVVYTTMVDHLCKTGRIELAQKFFLDMI 563
+LA FD+M++ PD V YT +VD LCK + + A +F+ M+
Sbjct: 130 LELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMV 176