BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041058
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]   137   9e-31
gb|EAZ16420.1| hypothetical protein OsJ_31889 [Oryza sativa Japo...   106   2e-21
ref|NP_001064855.1| Os10g0477200 [Oryza sativa Japonica Group] g...   106   2e-21

>ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  140 bits (354), Expect = 8e-32
 Identities = 72/116 (62%), Positives = 87/116 (75%)
 Frame = -3

Query: 349 GSLIDMYSKCGRRDLVERVLMKMEIKNTAVINEIIMTYVNEGNMMEASVQLYSMLNHGLK 170
           GS+IDMYSKCG  D  E+V +K E KNTA+ NE+I  YVNEG + +A   L SM   G K
Sbjct: 84  GSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWK 143

Query: 169 PDMITYNTMLSGFAREGQKVDAFKFLSDMIQMGLVPNIVTMNVLISGFQKSGLSGE 2
           PD+ITYNT+LSG AR G K  AF+ LS+M+QMGL PN+V+ NVLISGFQ+SGLS E
Sbjct: 144 PDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYE 199


>ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 677

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/116 (56%), Positives = 89/116 (76%)
 Frame = -3

Query: 349 GSLIDMYSKCGRRDLVERVLMKMEIKNTAVINEIIMTYVNEGNMMEASVQLYSMLNHGLK 170
           GSL+DMYSKCG+ D  E +  K E KN  + NEII TY+N+G    A     SM +HGLK
Sbjct: 378 GSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLK 437

Query: 169 PDMITYNTMLSGFAREGQKVDAFKFLSDMIQMGLVPNIVTMNVLISGFQKSGLSGE 2
           PD++TYNT+L+G+A+ GQKV+A++ LSDM+Q  LVPN++++NVL+SGFQ+SGL+ E
Sbjct: 438 PDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLNVLVSGFQQSGLNYE 493



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/111 (35%), Positives = 61/111 (54%)
 Frame = -3

Query: 346 SLIDMYSKCGRRDLVERVLMKMEIKNTAVINEIIMTYVNEGNMMEASVQLYSMLNHGLKP 167
           +L+D Y  CG       V   M  K+      ++  Y+ EG + EA    +SM + GLKP
Sbjct: 208 ALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLKP 267

Query: 166 DMITYNTMLSGFAREGQKVDAFKFLSDMIQMGLVPNIVTMNVLISGFQKSG 14
           D+I++N ++SGFAR G+   A  +L  M + GL P + + N +ISG  ++G
Sbjct: 268 DLISWNALVSGFARYGETNTALTYLEAMQEEGLRPRVNSWNGVISGCVQNG 318


>emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  137 bits (345), Expect = 9e-31
 Identities = 71/116 (61%), Positives = 85/116 (73%)
 Frame = -3

Query: 349 GSLIDMYSKCGRRDLVERVLMKMEIKNTAVINEIIMTYVNEGNMMEASVQLYSMLNHGLK 170
           GS+IDMYSKCG  D  E+V  K E KNTA+ NE+I  YVNEG + +A   L SM   G K
Sbjct: 393 GSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWK 452

Query: 169 PDMITYNTMLSGFAREGQKVDAFKFLSDMIQMGLVPNIVTMNVLISGFQKSGLSGE 2
           PD+ITYNT+LSG AR G K  A + LS+M+QMGL PN+V+ NVLISGFQ+SGLS E
Sbjct: 453 PDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYE 508



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/113 (34%), Positives = 61/113 (53%)
 Frame = -3

Query: 352 GGSLIDMYSKCGRRDLVERVLMKMEIKNTAVINEIIMTYVNEGNMMEASVQLYSMLNHGL 173
           G +LI  YS CG       V   M+ ++      +I  Y+ EG   EA    + M   G+
Sbjct: 221 GNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGV 280

Query: 172 KPDMITYNTMLSGFAREGQKVDAFKFLSDMIQMGLVPNIVTMNVLISGFQKSG 14
           KPD+I+++ +LSGFAR G+   A + L +M + GL P + + N +ISG  ++G
Sbjct: 281 KPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNG 333


>gb|EAZ16420.1| hypothetical protein OsJ_31889 [Oryza sativa Japonica Group]
          Length = 664

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/113 (46%), Positives = 71/113 (62%)
 Frame = -3

Query: 352 GGSLIDMYSKCGRRDLVERVLMKMEIKNTAVINEIIMTYVNEGNMMEASVQLYSMLNHGL 173
           G SLI MYS+CG       V   +E KN  V NE+I +Y+NE  M EA      M  +GL
Sbjct: 47  GSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRSYINEERMNEAWEAFRLMKENGL 106

Query: 172 KPDMITYNTMLSGFAREGQKVDAFKFLSDMIQMGLVPNIVTMNVLISGFQKSG 14
           +PD ITYN+ ++ +AR GQK  A+  LS+M+++GL PN+V+MN LISG    G
Sbjct: 107 QPDTITYNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNVVSMNALISGLHHHG 159


>ref|NP_001064855.1| Os10g0477200 [Oryza sativa Japonica Group]
           gi|110289259|gb|AAP54276.2| PPR986-12, putative,
           expressed [Oryza sativa Japonica Group]
           gi|110289260|gb|ABG66139.1| PPR986-12, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113639464|dbj|BAF26769.1| Os10g0477200 [Oryza sativa
           Japonica Group] gi|215695099|dbj|BAG90290.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 699

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/113 (46%), Positives = 71/113 (62%)
 Frame = -3

Query: 352 GGSLIDMYSKCGRRDLVERVLMKMEIKNTAVINEIIMTYVNEGNMMEASVQLYSMLNHGL 173
           G SLI MYS+CG       V   +E KN  V NE+I +Y+NE  M EA      M  +GL
Sbjct: 82  GSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRSYINEERMNEAWEAFRLMKENGL 141

Query: 172 KPDMITYNTMLSGFAREGQKVDAFKFLSDMIQMGLVPNIVTMNVLISGFQKSG 14
           +PD ITYN+ ++ +AR GQK  A+  LS+M+++GL PN+V+MN LISG    G
Sbjct: 142 QPDTITYNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNVVSMNALISGLHHHG 194