BLASTX nr result

ID: Coptis21_contig00041041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041041
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002444551.1| hypothetical protein SORBIDRAFT_07g023700 [S...    57   1e-06
tpg|DAA48544.1| TPA: hypothetical protein ZEAMMB73_180385 [Zea m...    57   2e-06
ref|XP_003571280.1| PREDICTED: uncharacterized protein LOC100834...    55   8e-06

>ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|222862080|gb|EEE99622.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/42 (54%), Positives = 34/42 (80%)
 Frame = +1

Query: 208 IESLTAKGIKRLCSELLELKKASDDEFHSSVYLNYAAFLGIF 333
           + S+  KGIKRLC+ELLE++  SDD+FH +++ NY+ FLG+F
Sbjct: 39  LHSMAGKGIKRLCAELLEIQALSDDDFHQNIFSNYSTFLGVF 80


>ref|XP_002444551.1| hypothetical protein SORBIDRAFT_07g023700 [Sorghum bicolor]
           gi|241940901|gb|EES14046.1| hypothetical protein
           SORBIDRAFT_07g023700 [Sorghum bicolor]
          Length = 944

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/42 (57%), Positives = 37/42 (88%)
 Frame = +1

Query: 208 IESLTAKGIKRLCSELLELKKASDDEFHSSVYLNYAAFLGIF 333
           + S+TAKGI+ LCSELLE+KKAS+++F ++VYL+Y +F+ +F
Sbjct: 72  LHSMTAKGIQHLCSELLEIKKASEEDFSANVYLSYLSFIRMF 113


>tpg|DAA48544.1| TPA: hypothetical protein ZEAMMB73_180385 [Zea mays]
          Length = 952

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = +1

Query: 208 IESLTAKGIKRLCSELLELKKASDDEFHSSVYLNYAAFLGIF 333
           + S+TAKGI+ LCSELLE+KKAS+ +F ++VYL+Y +F+ +F
Sbjct: 66  LHSMTAKGIQHLCSELLEIKKASEQDFSANVYLSYLSFIRMF 107


>ref|XP_003571280.1| PREDICTED: uncharacterized protein LOC100834013 [Brachypodium
           distachyon]
          Length = 840

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = +1

Query: 205 KIESLTAKGIKRLCSELLELKKASDDEFHSSVYLNYAAFLGIF 333
           ++ S+TAKGIK LCSELLE+ KAS ++F   V+L Y +FL +F
Sbjct: 2   ELHSMTAKGIKHLCSELLEINKASQEDFQRKVHLTYLSFLRLF 44


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