BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040890
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    59   4e-07
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   6e-06
emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    55   6e-06
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    55   8e-06
gb|ABK28199.1| unknown [Arabidopsis thaliana]                          55   8e-06

>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/69 (46%), Positives = 42/69 (60%)
 Frame = -1

Query: 285 PKDGFVKLNTDGASLGNLGYAGGGCILRDSEGKFLMGAAIPIFYATNNEAEFLALFYGLQ 106
           P+DG+VKLNTDGAS GN G+A  G +LRD  G ++ G A+ I   +   AE   ++YGL 
Sbjct: 156 PEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLF 215

Query: 105 I*TKTGIER 79
           I    G  R
Sbjct: 216 IAWGRGARR 224


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = -1

Query: 285  PKDGFVKLNTDGASLGNLGYAGGGCILRDSEGKFLMGAAIPIFYATNNEAEFLALFYGLQ 106
            PK+G+VKLNTDGAS GN G AGGG ++R   G+     AI     T  +AE LA+  GL 
Sbjct: 1212 PKEGWVKLNTDGASKGNPGPAGGGGLIRGPRGEIHEVFAINCGSCTCTKAELLAVLRGLM 1271

Query: 105  I 103
            I
Sbjct: 1272 I 1272


>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = -1

Query: 285 PKDGFVKLNTDGASLGNLGYAGGGCILRDSEGKFLMGAAIPIFYATNNEAEFLALFYGLQ 106
           P  G+VKLN DG+  G  G AGGG +LRD++G F+   A P+  + +  AE  AL  GL+
Sbjct: 230 PGAGWVKLNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMAEIGALEGGLR 289

Query: 105 I*TKTGIER 79
           +  K  +ER
Sbjct: 290 LALKLNVER 298


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/67 (43%), Positives = 41/67 (61%)
 Frame = -1

Query: 303 MLNGFHPKDGFVKLNTDGASLGNLGYAGGGCILRDSEGKFLMGAAIPIFYATNNEAEFLA 124
           M++   P +G++KLNTDGAS GN G A  G ILR  +G ++ G A+ I   +   AE   
Sbjct: 623 MVSWVKPAEGWLKLNTDGASKGNPGLATAGGILRQQDGSWIGGFAVNIGICSAPLAELWR 682

Query: 123 LFYGLQI 103
           ++YGL I
Sbjct: 683 VYYGLYI 689


>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -1

Query: 285 PKDGFVKLNTDGASLGNLGYAGGGCILRDSEGKFLMGAAIPIFYATNNEAEFLALFYGLQ 106
           P++G+ KLNTDGAS GN G A  G +LRD EG +  G A+ I   +   AE   ++YGL 
Sbjct: 149 PEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLY 208

Query: 105 I 103
           I
Sbjct: 209 I 209