BLASTX nr result

ID: Coptis21_contig00040735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040735
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...   156   1e-36
emb|CBI18109.3| unnamed protein product [Vitis vinifera]              156   1e-36
ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...   154   7e-36
ref|XP_004156673.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   146   2e-33

>ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1|
            predicted protein [Populus trichocarpa]
          Length = 1186

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/123 (61%), Positives = 91/123 (73%)
 Frame = -3

Query: 372  TSWQTLSPLAIASFEPFFSARRPVFLSNMGEVPQASEFDIAAVVVHVGEVYTCGHQKRQW 193
            T WQ LS LA+  F+PFFS R PV LSN+GEVP   EFDIAA+V+HVG++YT   QK+QW
Sbjct: 1008 TKWQPLSSLAMQQFQPFFSPRAPVLLSNLGEVPLCREFDIAALVLHVGDIYTAAQQKKQW 1067

Query: 192  VFVTDGSTSVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFFNMIKREPDRM 13
            VFVTD S S  +S+++  SLLAISFC+P  DN S  PINY LAGSTIG  N+IKR  D+ 
Sbjct: 1068 VFVTDSSISRFDSEDTSKSLLAISFCSPYMDNDSFTPINYNLAGSTIGLCNLIKRAKDQT 1127

Query: 12   NHL 4
             HL
Sbjct: 1128 YHL 1130


>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/123 (62%), Positives = 94/123 (76%)
 Frame = -3

Query: 372  TSWQTLSPLAIASFEPFFSARRPVFLSNMGEVPQASEFDIAAVVVHVGEVYTCGHQKRQW 193
            T W  LSPLAI  FEPF + R+ V LSN+GE+P +SEFDIAA+VV+VGEVYT  HQK+QW
Sbjct: 936  TKWNPLSPLAIEHFEPFLNPRKSVLLSNLGEIPLSSEFDIAALVVYVGEVYTAAHQKKQW 995

Query: 192  VFVTDGSTSVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFFNMIKREPDRM 13
            VFVTDGS S   S+E+ N LLAISFC+P+ D+ S  P+N  L GST+GF N+IKR  D+M
Sbjct: 996  VFVTDGSVSELGSEEASNCLLAISFCSPSVDD-SFAPVNSNLEGSTVGFVNLIKRAKDQM 1054

Query: 12   NHL 4
            N L
Sbjct: 1055 NQL 1057


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/123 (62%), Positives = 94/123 (76%)
 Frame = -3

Query: 372  TSWQTLSPLAIASFEPFFSARRPVFLSNMGEVPQASEFDIAAVVVHVGEVYTCGHQKRQW 193
            T W  LSPLAI  FEPF + R+ V LSN+GE+P +SEFDIAA+VV+VGEVYT  HQK+QW
Sbjct: 956  TKWNPLSPLAIEHFEPFLNPRKSVLLSNLGEIPLSSEFDIAALVVYVGEVYTAAHQKKQW 1015

Query: 192  VFVTDGSTSVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFFNMIKREPDRM 13
            VFVTDGS S   S+E+ N LLAISFC+P+ D+ S  P+N  L GST+GF N+IKR  D+M
Sbjct: 1016 VFVTDGSVSELGSEEASNCLLAISFCSPSVDD-SFAPVNSNLEGSTVGFVNLIKRAKDQM 1074

Query: 12   NHL 4
            N L
Sbjct: 1075 NQL 1077


>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus
            communis] gi|223533978|gb|EEF35700.1| breast cancer type
            2 susceptibility protein brca2, putative [Ricinus
            communis]
          Length = 1156

 Score =  154 bits (389), Expect = 7e-36
 Identities = 76/123 (61%), Positives = 92/123 (74%)
 Frame = -3

Query: 372  TSWQTLSPLAIASFEPFFSARRPVFLSNMGEVPQASEFDIAAVVVHVGEVYTCGHQKRQW 193
            T W +LS LAI  F+PFFS R  V LSN+GEVP +SEFD AA VV+VGEVYT    K+QW
Sbjct: 943  TKWLSLSSLAIQHFQPFFSPRESVSLSNLGEVPLSSEFDTAAYVVYVGEVYTTAQWKKQW 1002

Query: 192  VFVTDGSTSVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFFNMIKREPDRM 13
            VFV D S S  +S+E  NSLLAISFCTP  ++GS  PIN  LAG+T+GFFN+IK+  D+M
Sbjct: 1003 VFVIDNSISTLKSEEISNSLLAISFCTPCINDGSFAPINSNLAGTTVGFFNLIKKAEDQM 1062

Query: 12   NHL 4
            NH+
Sbjct: 1063 NHV 1065


>ref|XP_004156673.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230245
            [Cucumis sativus]
          Length = 1111

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/123 (56%), Positives = 89/123 (72%)
 Frame = -3

Query: 372  TSWQTLSPLAIASFEPFFSARRPVFLSNMGEVPQASEFDIAAVVVHVGEVYTCGHQKRQW 193
            T WQ+LSP ++  FEPF+  R+ V LSN+GEVP +SEFD+ A++VHVGEV+    QK+QW
Sbjct: 932  TKWQSLSPQSMKCFEPFYKPRKSVLLSNLGEVPLSSEFDVVAIIVHVGEVFATAQQKKQW 991

Query: 192  VFVTDGSTSVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFFNMIKREPDRM 13
            +FV DG  S S S+   NSLLAISFC+   D+ S VP+N  L GST GF N+IKR  D++
Sbjct: 992  IFVVDGFVSESHSEGISNSLLAISFCSQYADDDSFVPMNSNLTGSTAGFCNLIKRPKDQI 1051

Query: 12   NHL 4
            NHL
Sbjct: 1052 NHL 1054


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