BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040641
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]   133   2e-29
ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [S...   120   1e-25
ref|NP_001145846.1| CRR4 [Zea mays] gi|219884683|gb|ACL52716.1| ...   120   1e-25
gb|ACG45171.1| CRR4 [Zea mays]                                        120   1e-25

>ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 618

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/106 (59%), Positives = 82/106 (77%)
 Frame = -3

Query: 418 LNVELAERSVQKLLVLEPENSGNYVLLSNIYSSAGRWKDALDMRNLMRDNGLQKTAAYSW 239
           LNVELAE + +KLL LEP+NSGNYV+LSNIY+SAGRW++AL +R LM+D  +QK AAYSW
Sbjct: 512 LNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSW 571

Query: 238 IELDDLVHKFLVGDMSHPMCEEIYNVVDGWGLQLQLTSYVPDLDLE 101
           +E++D VHKFLVGD SHP  +E+Y+ +DG  L      Y  D ++E
Sbjct: 572 VEVEDRVHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGYELDFEIE 617


>emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
          Length = 396

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/106 (58%), Positives = 81/106 (76%)
 Frame = -3

Query: 418 LNVELAERSVQKLLVLEPENSGNYVLLSNIYSSAGRWKDALDMRNLMRDNGLQKTAAYSW 239
           LNVELAE + +KLL LEP+NSGNYV+LSNIY+SA RW++AL +R LM+D  +QK AAYSW
Sbjct: 290 LNVELAELAGKKLLELEPDNSGNYVILSNIYASASRWQEALKVRKLMKDKRVQKAAAYSW 349

Query: 238 IELDDLVHKFLVGDMSHPMCEEIYNVVDGWGLQLQLTSYVPDLDLE 101
           +E++D VHKFLVGD SHP  +E+Y+ +DG  L      Y  D ++E
Sbjct: 350 VEVEDRVHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGYELDFEIE 395


>ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
           gi|241930382|gb|EES03527.1| hypothetical protein
           SORBIDRAFT_03g032890 [Sorghum bicolor]
          Length = 695

 Score =  120 bits (301), Expect = 1e-25
 Identities = 63/104 (60%), Positives = 75/104 (72%)
 Frame = -3

Query: 415 NVELAERSVQKLLVLEPENSGNYVLLSNIYSSAGRWKDALDMRNLMRDNGLQKTAAYSWI 236
           +VELA+ +  KL+ LEP NS  YVLLSNIY+ AG W D  ++R+LMR   LQK +AYSWI
Sbjct: 590 DVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWI 649

Query: 235 ELDDLVHKFLVGDMSHPMCEEIYNVVDGWGLQLQLTSYVPDLDL 104
           ELD  VH+FLV D  HP   EIYNVVDG GLQL+ TS  PD +L
Sbjct: 650 ELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLERTS--PDHEL 691


>ref|NP_001145846.1| CRR4 [Zea mays] gi|219884683|gb|ACL52716.1| unknown [Zea mays]
           gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
          Length = 601

 Score =  120 bits (300), Expect = 1e-25
 Identities = 63/104 (60%), Positives = 76/104 (73%)
 Frame = -3

Query: 415 NVELAERSVQKLLVLEPENSGNYVLLSNIYSSAGRWKDALDMRNLMRDNGLQKTAAYSWI 236
           +VELA+ +  KL+VLEP +S  YVLLSNIY+ AG W D  ++R+LMR   LQK +AYSWI
Sbjct: 495 DVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWI 554

Query: 235 ELDDLVHKFLVGDMSHPMCEEIYNVVDGWGLQLQLTSYVPDLDL 104
           ELD  VH+FLV D  HP   EIYNVVDG GLQL+ TS  PD +L
Sbjct: 555 ELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLERTS--PDHEL 596


>gb|ACG45171.1| CRR4 [Zea mays]
          Length = 601

 Score =  120 bits (300), Expect = 1e-25
 Identities = 63/104 (60%), Positives = 76/104 (73%)
 Frame = -3

Query: 415 NVELAERSVQKLLVLEPENSGNYVLLSNIYSSAGRWKDALDMRNLMRDNGLQKTAAYSWI 236
           +VELA+ +  KL+VLEP +S  YVLLSNIY+ AG W D  ++R+LMR   LQK +AYSWI
Sbjct: 495 DVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWI 554

Query: 235 ELDDLVHKFLVGDMSHPMCEEIYNVVDGWGLQLQLTSYVPDLDL 104
           ELD  VH+FLV D  HP   EIYNVVDG GLQL+ TS  PD +L
Sbjct: 555 ELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLERTS--PDHEL 596