BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040640
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 99   3e-19
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               99   4e-19
emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]    97   2e-18
gb|ABJ96383.1| hypothetical protein [Prunus persica]                   96   2e-18
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...    96   3e-18

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/86 (54%), Positives = 63/86 (73%)
 Frame = +1

Query: 1    LLSWSAKIYWICLLLQDLRIPLSMPPLIHCDKISAISLSNNPVFHARTKHVEIDYHYIRE 180
            L + +A+I W+C +L D+  PL   P+I+CD  S I+L+ NPVFHARTKHVEIDYHYIRE
Sbjct: 1549 LANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHVEIDYHYIRE 1608

Query: 181  LVTRNLVDVQYLSTKDQLADIFTKGL 258
             V    + VQ++++  Q+ADIFTK L
Sbjct: 1609 KVLLGHIGVQHVASLLQIADIFTKPL 1634


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = +1

Query: 13   SAKIYWICLLLQDLRIPLSMPPLIHCDKISAISLSNNPVFHARTKHVEIDYHYIRELVTR 192
            +A++ W+  L +DL + LS P  I CD IS+ISL++NPVFH+RTKH+E+DYHY+R+ V R
Sbjct: 1271 AAELSWLRSLFRDLNVFLSCPR-IWCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVR 1329

Query: 193  NLVDVQYLSTKDQLADIFTKGL 258
              + V Y+ST DQ ADIFTKGL
Sbjct: 1330 QELAVSYVSTADQTADIFTKGL 1351


>emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]
          Length = 791

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 40/81 (49%), Positives = 63/81 (77%)
 Frame = +1

Query: 13  SAKIYWICLLLQDLRIPLSMPPLIHCDKISAISLSNNPVFHARTKHVEIDYHYIRELVTR 192
           +A++YW+ +LL +L I L  PP+I CD ISA++L++NP+FHAR+KH+++DYH++ E V  
Sbjct: 673 TAEVYWLRMLLCELEISLDSPPVIWCDNISALALASNPIFHARSKHIKVDYHFVHEKVAH 732

Query: 193 NLVDVQYLSTKDQLADIFTKG 255
             + ++++ST  Q ADIFTKG
Sbjct: 733 QDIILEHISTSIQPADIFTKG 753


>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/82 (54%), Positives = 59/82 (71%)
 Frame = +1

Query: 13  SAKIYWICLLLQDLRIPLSMPPLIHCDKISAISLSNNPVFHARTKHVEIDYHYIRELVTR 192
           S +I W+  LLQ+L    S  P++ CD + A  LS NP+FHARTKHVEIDYH++R+ V+ 
Sbjct: 93  STEITWLRSLLQELGFSTSTSPVLWCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVSA 152

Query: 193 NLVDVQYLSTKDQLADIFTKGL 258
             + VQ++STKDQLADI TK L
Sbjct: 153 GKLSVQFISTKDQLADIMTKPL 174


>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 38/82 (46%), Positives = 62/82 (75%)
 Frame = +1

Query: 13   SAKIYWICLLLQDLRIPLSMPPLIHCDKISAISLSNNPVFHARTKHVEIDYHYIRELVTR 192
            +A++ W+  +L++L + +   P++ CD + A  LS+NPVFHARTKH+EIDYH+++E V  
Sbjct: 1664 TAELIWVRSVLEELGVKIDQSPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVAN 1723

Query: 193  NLVDVQYLSTKDQLADIFTKGL 258
             ++D++++ TKDQ+AD FTK L
Sbjct: 1724 KMLDIRFIGTKDQIADGFTKAL 1745