BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040496
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37517.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   173   1e-41
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   170   1e-40
ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial...   168   4e-40

>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/100 (83%), Positives = 90/100 (90%)
 Frame = +2

Query: 2   IDIAGEHFSASGRVIIAKNYLDVYQYESWGNSLIPKYLFGQQFVPTILTLDPGITRPPPL 181
           IDIAGE FS+SGRVIIAKNYLDVY++ESWG S+IP Y+FGQQF+PT LTLD G+TRPPPL
Sbjct: 111 IDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTTLTLDSGVTRPPPL 170

Query: 182 LSEADLLMRMDKEGIGTDATMHDHIKKLLDRSYATKDVNT 301
           LSEADLL  MDK GIGTDATMHDHIKKLLDR YATKD NT
Sbjct: 171 LSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNT 210


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/100 (83%), Positives = 90/100 (90%)
 Frame = +2

Query: 2   IDIAGEHFSASGRVIIAKNYLDVYQYESWGNSLIPKYLFGQQFVPTILTLDPGITRPPPL 181
           IDIAGE FS+SGRVIIAKNYLDVY++ESWG S+IP Y+FGQQF+PT LTLD G+TRPPPL
Sbjct: 436 IDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTTLTLDSGVTRPPPL 495

Query: 182 LSEADLLMRMDKEGIGTDATMHDHIKKLLDRSYATKDVNT 301
           LSEADLL  MDK GIGTDATMHDHIKKLLDR YATKD NT
Sbjct: 496 LSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNT 535


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/100 (81%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   IDIAGEHFSASGRVIIAKNYLDVYQYESWGNSLIPKYLFGQQFVPTILTLDPGITRPPPL 181
           IDIAGE FSASGRVI+AKNYLDVY++ESWG S+IP Y+ GQQF+PT LTLD G+TRPPPL
Sbjct: 439 IDIAGEQFSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQFMPTTLTLDSGVTRPPPL 498

Query: 182 LSEADLLMRMDKEGIGTDATMHDHIKKLLDRSYATKDVNT 301
           LSE+DLL  MDK GIGTDATMHDHIKKLLDR YATKD NT
Sbjct: 499 LSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANT 538


>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
           predicted protein [Populus trichocarpa]
          Length = 910

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/100 (81%), Positives = 88/100 (88%)
 Frame = +2

Query: 2   IDIAGEHFSASGRVIIAKNYLDVYQYESWGNSLIPKYLFGQQFVPTILTLDPGITRPPPL 181
           IDIAGE FSASGRVI+AKNYLDVY++ESWG+S+IP YL GQQF+P  LTLD G+TRPPPL
Sbjct: 437 IDIAGERFSASGRVILAKNYLDVYRFESWGDSMIPTYLQGQQFIPATLTLDSGVTRPPPL 496

Query: 182 LSEADLLMRMDKEGIGTDATMHDHIKKLLDRSYATKDVNT 301
           LSEADLL  MDK GIGTDATMHDHIKKLLDR Y TKD NT
Sbjct: 497 LSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANT 536


>ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial [Cucumis sativus]
          Length = 607

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/100 (81%), Positives = 88/100 (88%)
 Frame = +2

Query: 2   IDIAGEHFSASGRVIIAKNYLDVYQYESWGNSLIPKYLFGQQFVPTILTLDPGITRPPPL 181
           IDIAGE FS SGR+I+A+NYLDVY++ESWG S IP Y+ GQQFVPT LTLD G+TRPPPL
Sbjct: 442 IDIAGELFSTSGRMILARNYLDVYRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPL 501

Query: 182 LSEADLLMRMDKEGIGTDATMHDHIKKLLDRSYATKDVNT 301
           LSEADLL  MDKEGIGTDATMHDHIKKLLDR YATKD NT
Sbjct: 502 LSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANT 541