BLASTX nr result

ID: Coptis21_contig00040480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040480
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880098.1| hypothetical protein ARALYDRAFT_322090 [Arab...    60   2e-07
ref|XP_002862482.1| hypothetical protein ARALYDRAFT_359589 [Arab...    60   2e-07
ref|XP_002278618.2| PREDICTED: uncharacterized protein LOC100245...    57   2e-06
emb|CBI20610.3| unnamed protein product [Vitis vinifera]               57   2e-06
emb|CAN70607.1| hypothetical protein VITISV_040197 [Vitis vinifera]    57   2e-06

>ref|XP_002880098.1| hypothetical protein ARALYDRAFT_322090 [Arabidopsis lyrata subsp.
           lyrata] gi|297325937|gb|EFH56357.1| hypothetical protein
           ARALYDRAFT_322090 [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/59 (38%), Positives = 37/59 (62%)
 Frame = +2

Query: 11  FNKTSEIDKEPVAIPIRIYHDKGTHNWWLQVSDDVNVGYWPSGTFPDMNNGASYVAWGG 187
           +N  SE D   +++ + I+ D+ T NWWL+++D+  +GYWP   F  + +GA  V WGG
Sbjct: 259 YNTVSEYDGAQLSLNLLIWKDQKTGNWWLKINDNDIIGYWPGSLFNSLGDGAIKVEWGG 317


>ref|XP_002862482.1| hypothetical protein ARALYDRAFT_359589 [Arabidopsis lyrata subsp.
           lyrata] gi|297308022|gb|EFH38740.1| hypothetical protein
           ARALYDRAFT_359589 [Arabidopsis lyrata subsp. lyrata]
          Length = 134

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/59 (38%), Positives = 37/59 (62%)
 Frame = +2

Query: 11  FNKTSEIDKEPVAIPIRIYHDKGTHNWWLQVSDDVNVGYWPSGTFPDMNNGASYVAWGG 187
           +N  SE D   +++ + I+ D+ T NWWL+++D+  +GYWP   F  + +GA  V WGG
Sbjct: 30  YNTVSEYDGAQLSLNLLIWKDQKTGNWWLKINDNDIIGYWPGSLFNSLGDGAIKVEWGG 88


>ref|XP_002278618.2| PREDICTED: uncharacterized protein LOC100245679 [Vitis vinifera]
          Length = 379

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = +2

Query: 41  PVAIPIRIYHDKGTHNWWLQVSDDVNVGYWPSGTFPDMNNGASYVAWGG 187
           P  I I IY D  T+NWW+Q    +N+GYWP   F  ++ GA  V WGG
Sbjct: 263 PYQITIYIYKDPYTNNWWVQYGGKINIGYWPHKLFKMLSYGAEAVEWGG 311


>emb|CBI20610.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = +2

Query: 41  PVAIPIRIYHDKGTHNWWLQVSDDVNVGYWPSGTFPDMNNGASYVAWGG 187
           P  I I IY D  T+NWW+Q    +N+GYWP   F  ++ GA  V WGG
Sbjct: 286 PYQITIYIYKDPYTNNWWVQYGGKINIGYWPHKLFKMLSYGAEAVEWGG 334


>emb|CAN70607.1| hypothetical protein VITISV_040197 [Vitis vinifera]
          Length = 990

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = +2

Query: 41  PVAIPIRIYHDKGTHNWWLQVSDDVNVGYWPSGTFPDMNNGASYVAWGG 187
           P  I I IY D  T+NWW+Q    +N+GYWP   F  ++ GA  V WGG
Sbjct: 296 PYQITIYIYKDPYTNNWWVQYGGKINIGYWPHKLFKMLSYGAEAVEWGG 344


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