BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040461
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...    67   1e-09
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    64   1e-08
ref|NP_565403.1| F-box-like protein [Arabidopsis thaliana] gi|33...    64   2e-08
sp|Q6DR20.1|FB110_ARATH RecName: Full=F-box protein At2g17036 gi...    64   2e-08
gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana]             64   2e-08

>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 44/98 (44%), Positives = 57/98 (58%)
 Frame = -3

Query: 296 NCDVKKVVVSPTATMDNFVIMGIHVYGLLVVCKSGDVAWTVVREDQKCRFHDLIHYKGEF 117
           N  ++KVV+    ++  FV++ IHV G L + KSGD  WT++ E     F D+I YKG F
Sbjct: 157 NLYMEKVVMIWLNSLTEFVLLTIHVSGKLAIFKSGDKRWTIINE-MPSPFDDVIVYKGRF 215

Query: 116 YAVSSTGRVCTVDPHALNLCLVAYDIVNGGRKKRFVES 3
           YAV +TGR   V     NL LV  + V GG KK  VES
Sbjct: 216 YAVDNTGRTVVVAMDT-NLGLVG-NPVFGGDKKYLVES 251


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = -3

Query: 296 NCDVKKVVVSPTATMDNFVIMGIHVYGLLVVCKSGDVAWTVVREDQKCRFHDLIHYKGEF 117
           N  ++KVV+        FV++ IHV G L + KSGD  WT++ E     F D+I YKG F
Sbjct: 157 NLYMEKVVMIWLNCETEFVLLTIHVSGKLAMFKSGDKRWTIINE-MPSPFDDVIVYKGRF 215

Query: 116 YAVSSTGRVCTVDPHALNLCL-VAYDIVNGGRKKRFVES 3
           YAV +TGR   V   AL+  L +  D V GG KK  VES
Sbjct: 216 YAVDNTGRTVVV---ALDTDLGLVGDPVFGGDKKYLVES 251


>ref|NP_565403.1| F-box-like protein [Arabidopsis thaliana]
           gi|330251483|gb|AEC06577.1| F-box-like protein
           [Arabidopsis thaliana]
          Length = 428

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = -3

Query: 251 DNFVIMGIHVYGLLVVCKSGDVAWTVVREDQKCRFHDLIHYKGEFYAVSSTGRVCTVDPH 72
           D FV++ I  YG L V +S D  WTV+ +    R  DLI + G F+A+   GR   VD  
Sbjct: 169 DKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYS 228

Query: 71  ALNLCLVAYDIVNGGRKKRFVES 3
           +  L L A  ++ GG KK  +ES
Sbjct: 229 SFKLTLAANPLIGGGDKKFLIES 251


>sp|Q6DR20.1|FB110_ARATH RecName: Full=F-box protein At2g17036 gi|50058935|gb|AAT69212.1|
           hypothetical protein At2g17036 [Arabidopsis thaliana]
          Length = 404

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = -3

Query: 251 DNFVIMGIHVYGLLVVCKSGDVAWTVVREDQKCRFHDLIHYKGEFYAVSSTGRVCTVDPH 72
           D FV++ I  YG L V +S D  WTV+ +    R  DLI + G F+A+   GR   VD  
Sbjct: 170 DKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYS 229

Query: 71  ALNLCLVAYDIVNGGRKKRFVES 3
           +  L L A  ++ GG KK  +ES
Sbjct: 230 SFKLTLAANPLIGGGDKKFLIES 252


>gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana]
          Length = 404

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = -3

Query: 251 DNFVIMGIHVYGLLVVCKSGDVAWTVVREDQKCRFHDLIHYKGEFYAVSSTGRVCTVDPH 72
           D FV++ I  YG L V +S D  WTV+ +    R  DLI + G F+A+   GR   VD  
Sbjct: 170 DKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYS 229

Query: 71  ALNLCLVAYDIVNGGRKKRFVES 3
           +  L L A  ++ GG KK  +ES
Sbjct: 230 SFKLTLAANPLIGGGDKKFLIES 252