BLASTX nr result

ID: Coptis21_contig00040448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040448
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170132.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich...    81   8e-14
ref|XP_004137033.1| PREDICTED: leucine-rich repeat extensin-like...    81   8e-14
emb|CBI21875.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002517887.1| serine-threonine protein kinase, plant-type,...    77   2e-12
gb|AFK41054.1| unknown [Medicago truncatula]                           69   4e-10

>ref|XP_004170132.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat extensin-like
           protein 4-like [Cucumis sativus]
          Length = 401

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   LGPCQNLTGKGVAFDDRQNCLPEKKSQRSKKDCEAAYANPIDCFDYHCGDSTGG 162
           +G C+NLT KG+AFDDR+NCLPEK  QRSKK+C A   +P+DCF++ CG   GG
Sbjct: 324 VGICRNLTAKGIAFDDRRNCLPEKAFQRSKKECSAVVEHPVDCFEHPCGGGGGG 377


>ref|XP_004137033.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like
           [Cucumis sativus]
          Length = 401

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   LGPCQNLTGKGVAFDDRQNCLPEKKSQRSKKDCEAAYANPIDCFDYHCGDSTGG 162
           +G C+NLT KG+AFDDR+NCLPEK  QRSKK+C A   +P+DCF++ CG   GG
Sbjct: 324 VGICRNLTAKGIAFDDRRNCLPEKAFQRSKKECSAVVEHPVDCFEHPCGGGGGG 377


>emb|CBI21875.3| unnamed protein product [Vitis vinifera]
          Length = 409

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 31/53 (58%), Positives = 39/53 (73%)
 Frame = +1

Query: 4   GPCQNLTGKGVAFDDRQNCLPEKKSQRSKKDCEAAYANPIDCFDYHCGDSTGG 162
           G CQNLT  G+ +DDR+NCLP+K  QRSKK CEA Y +P+DC ++HC    GG
Sbjct: 336 GICQNLTSNGIKYDDRRNCLPDKPLQRSKKQCEAVYKHPVDCLEHHCSGGGGG 388


>ref|XP_002517887.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223542869|gb|EEF44405.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 417

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
 Frame = +1

Query: 4   GPCQNLTGKGVAFDDRQNCLPEKKSQRSKKDCEAAYANPIDCFDYHC--GDSTGGM 165
           G C NLT KG+AFDDR+NCLPEK  QRSKK+C+    +P+DC++  C  G  +GGM
Sbjct: 334 GACMNLTSKGIAFDDRRNCLPEKPLQRSKKECDPVLEHPVDCYEQRCVAGSRSGGM 389


>gb|AFK41054.1| unknown [Medicago truncatula]
          Length = 116

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +1

Query: 4   GPCQNLTGKGVAFDDRQNCLPEKKSQRSKKDCEAAYANPIDCFDYHC 144
           G C+NLT K +AFDDR+NCLPEK  QRS+K+C A   +P+DCF+  C
Sbjct: 31  GICENLTSKKIAFDDRRNCLPEKALQRSEKECSAKLEHPVDCFELCC 77


Top