BLASTX nr result

ID: Coptis21_contig00040432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040432
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521189.1| PREDICTED: uncharacterized protein LOC100812...    64   2e-08
ref|XP_002308968.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
gb|AFK49418.1| unknown [Medicago truncatula]                           56   3e-06
gb|AFK35872.1| unknown [Lotus japonicus]                               56   3e-06
gb|AFK48905.1| unknown [Lotus japonicus]                               55   5e-06

>ref|XP_003521189.1| PREDICTED: uncharacterized protein LOC100812148 [Glycine max]
          Length = 245

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = +3

Query: 3   ECRHPKTAEDFVRSNSKFTSKVKQHLRSISASETLPFRDRNLR--GGFMSSTTASMNRRV 176
           +C+HPKTAEDF++  +   SK K  LR  + SE LPFRDR+LR     + S+ A  + R 
Sbjct: 50  DCKHPKTAEDFLKPTTTRKSKAKL-LRFATISEILPFRDRDLRENSSILESSYAKSSERS 108

Query: 177 NRSKTSMPTPDRVQEDQENENPNLSTP 257
            R   S        ED EN NPN S P
Sbjct: 109 RRPSCS----GSFYEDSENRNPNFSAP 131


>ref|XP_002308968.1| predicted protein [Populus trichocarpa] gi|222854944|gb|EEE92491.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/116 (36%), Positives = 58/116 (50%)
 Frame = +3

Query: 6   CRHPKTAEDFVRSNSKFTSKVKQHLRSISASETLPFRDRNLRGGFMSSTTASMNRRVNRS 185
           C+HPKT ED+++S  K  SKVK  L+S++ SE LPFRDRN R   +       N    ++
Sbjct: 51  CKHPKTIEDYLKS--KRGSKVK-FLKSVTISEMLPFRDRNRRDAKLKKAEIP-NPHTLKT 106

Query: 186 KTSMPTPDRVQEDQENENPNLSTPSXXXXXXXXXXXXVLEKSPLDLIQEERKPKLK 353
           K    +    +ED EN+NPNLS                L ++  DL     K KL+
Sbjct: 107 KV-FKSVHSFREDCENKNPNLSNRKPDTDKLPKKANIRLREARDDLHANSTKAKLR 161


>gb|AFK49418.1| unknown [Medicago truncatula]
          Length = 214

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
 Frame = +3

Query: 3   ECRHPKTAEDFVRSNSKFTSKVKQHLRSISASETLPFRDRNLRGGFMSSTTASMNRRVNR 182
           +C HPKTAEDF+RS S F ++   +L     SE  P  D+  R G        + RRV  
Sbjct: 52  DCNHPKTAEDFLRSPSPFKARSPFYL-----SENFPSGDQIRRDG-------KIKRRVPP 99

Query: 183 SKTSMPTPD--RVQEDQENENPNLSTPSXXXXXXXXXXXXVLEKSPLDLIQEERK-PKLK 353
             +S P  D  R   D EN+NPNL TP               +K   D +QE  + P LK
Sbjct: 100 LSSSSPQDDKFRFNIDNENQNPNLVTPQFKSMKSLIKSSEEKKKLVDDTLQESTEVPSLK 159


>gb|AFK35872.1| unknown [Lotus japonicus]
          Length = 353

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   ECRHPKTAEDFVRSNSKFTSKVKQHLRSISASETLPFRDRNLRGGFMSSTTASMNRRVNR 182
           +C+HPKTAEDF+RS S F    K+        E  PF D+N R G        + RRV  
Sbjct: 49  DCKHPKTAEDFLRSPSPF----KKSKSPAYGLENSPFGDQNRRDG-------RIKRRVPA 97

Query: 183 SKTSMPTPD--RVQEDQENENPNLSTPS 260
             ++ P  D  R   D EN++PN+ TPS
Sbjct: 98  LSSASPPDDNFRFNLDSENQDPNMCTPS 125


>gb|AFK48905.1| unknown [Lotus japonicus]
          Length = 252

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/83 (42%), Positives = 43/83 (51%)
 Frame = +3

Query: 3   ECRHPKTAEDFVRSNSKFTSKVKQHLRSISASETLPFRDRNLRGGFMSSTTASMNRRVNR 182
           +C+HPKTAEDF++  +    K K  LR  S SE LPFRDR  R    SS  AS N +   
Sbjct: 53  DCKHPKTAEDFLKPATTRNPKAKL-LRFGSFSEILPFRDRLRRQN--SSAVASSNFKTCE 109

Query: 183 SKTSMPTPDRVQEDQENENPNLS 251
                     + E+ EN NPN S
Sbjct: 110 KSRRPSCSGSLNEESENRNPNFS 132


Top