BLASTX nr result

ID: Coptis21_contig00040424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040424
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   111   5e-23
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...    94   9e-18
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...    92   3e-17
tpg|DAA44746.1| TPA: hypothetical protein ZEAMMB73_820146 [Zea m...    78   9e-13

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -1

Query: 288  ESSGDDVSYGSFHLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAI 109
            ++  D  S   F L+RLLE FSLKQF  S   KHIKA++D+PGND+E PLPFISGLP  I
Sbjct: 794  DTYNDGASCRPFLLKRLLESFSLKQFRLSGSPKHIKAEIDLPGNDTE-PLPFISGLPVGI 852

Query: 108  TFQITLHNVSSEDRLWLRMAV-EEIIQYVFLDLNQ 7
              +ITL+NVSSE+RLWLRM V E+++++VFLDLNQ
Sbjct: 853  PLEITLYNVSSENRLWLRMIVHEQLMEFVFLDLNQ 887


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = -1

Query: 288  ESSGDDVSYGSFHLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAI 109
            ESS   +S   F +  L++ F+LKQF    +++HI A+LDVPGNDSENPLPF+SGLP AI
Sbjct: 785  ESSKAGISCSLFLITNLVDFFTLKQFSLCPRVRHINAELDVPGNDSENPLPFVSGLPVAI 844

Query: 108  TFQITLHNVSSEDRLWLRMAV-EEIIQYVFLDLN 10
               ITL+NVSSE+RLWL + + +E  Q+VFLD N
Sbjct: 845  PLDITLYNVSSENRLWLTIRMSQESTQFVFLDSN 878


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
 Frame = -1

Query: 255 FHLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQITLHNVSS 76
           F   +L++ FS+KQF     ++H+ A ++VP  DSENPLPF+ GLP AI   ITLHNV S
Sbjct: 740 FGFMKLIDHFSIKQFSSCTGVRHLYAAMNVPNIDSENPLPFVPGLPVAIPLTITLHNVLS 799

Query: 75  EDRLWLRMAV-EEIIQYVFLDLN 10
           E RLWLR+A+ EE IQ++FLDLN
Sbjct: 800 ETRLWLRLAMSEESIQFLFLDLN 822


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
            gi|355498406|gb|AES79609.1| Integrator complex subunit
            [Medicago truncatula]
          Length = 906

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/95 (45%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
 Frame = -1

Query: 291  EESSGDDVSYGSFHLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTA 112
            + +S +  S      +R L+LFSLK+FV+   I+ +KA+L +  NDS +P PF+SGLP +
Sbjct: 741  QTTSINGASCSPLQFDRCLKLFSLKKFVFHGTIRQLKAELRISNNDSLHPFPFVSGLPVS 800

Query: 111  ITFQITLHNVSSEDRLWLRMAVEE-IIQYVFLDLN 10
            I  +ITLHN+ S+ +LWLRM++++ ++QY+FLDL+
Sbjct: 801  IPCEITLHNIISKCKLWLRMSLDDGLVQYIFLDLD 835


>tpg|DAA44746.1| TPA: hypothetical protein ZEAMMB73_820146 [Zea mays]
          Length = 501

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/84 (45%), Positives = 54/84 (64%)
 Frame = -1

Query: 252 HLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQITLHNVSSE 73
           ++  L +LF LK       +K I A L V  NDSENPL +I GLP  ++F+I+L N+S  
Sbjct: 349 NINNLFQLFHLKPTTDFGMLKVISAMLRVCDNDSENPLQYICGLPVGVSFKISLWNISGH 408

Query: 72  DRLWLRMAVEEIIQYVFLDLNQFE 1
            RLWLRM + E +Q+ FL+ ++FE
Sbjct: 409 HRLWLRMTIGESVQHTFLEFSRFE 432


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