BLASTX nr result

ID: Coptis21_contig00040416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040416
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...   103   2e-20
emb|CBI25461.3| unnamed protein product [Vitis vinifera]              103   2e-20
emb|CAN67856.1| hypothetical protein VITISV_041256 [Vitis vinifera]   103   2e-20
ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative ...    98   8e-19
ref|XP_004148181.1| PREDICTED: anaphase-promoting complex subuni...    96   3e-18

>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis
           vinifera]
          Length = 1716

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/99 (53%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
 Frame = -2

Query: 287 WPLPCGLLLQKAADVSYPAFGPYSASSTSLNARDFPRLKRELGYSPQHNLHA----DHTI 120
           WPLP GLLLQ+A +   PA  P+S+SS  L  RD  R KRE+G+SP+ N       D+ I
Sbjct: 141 WPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRPKREIGHSPRQNFSLLNTFDYII 200

Query: 119 RGDATKLSSHLILKDPLEEPQAILVEERGKLVPMRDLDE 3
           +GD    SSHLILKDPLEEP +  +EERGKL  M++ DE
Sbjct: 201 KGDGASFSSHLILKDPLEEPHSTYIEERGKLNIMKEFDE 239


>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/99 (53%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
 Frame = -2

Query: 287 WPLPCGLLLQKAADVSYPAFGPYSASSTSLNARDFPRLKRELGYSPQHNLHA----DHTI 120
           WPLP GLLLQ+A +   PA  P+S+SS  L  RD  R KRE+G+SP+ N       D+ I
Sbjct: 141 WPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRPKREIGHSPRQNFSLLNTFDYII 200

Query: 119 RGDATKLSSHLILKDPLEEPQAILVEERGKLVPMRDLDE 3
           +GD    SSHLILKDPLEEP +  +EERGKL  M++ DE
Sbjct: 201 KGDGASFSSHLILKDPLEEPHSTYIEERGKLNIMKEFDE 239


>emb|CAN67856.1| hypothetical protein VITISV_041256 [Vitis vinifera]
          Length = 510

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/99 (53%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
 Frame = -2

Query: 287 WPLPCGLLLQKAADVSYPAFGPYSASSTSLNARDFPRLKRELGYSPQHNLHA----DHTI 120
           WPLP GLLLQ+A +   PA  P+S+SS  L  RD  R KRE+G+SP+ N       D+ I
Sbjct: 60  WPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRPKREIGHSPRQNFSLLNTFDYII 119

Query: 119 RGDATKLSSHLILKDPLEEPQAILVEERGKLVPMRDLDE 3
           +GD    SSHLILKDPLEEP +  +EERGKL  M++ DE
Sbjct: 120 KGDGASFSSHLILKDPLEEPHSTYIEERGKLNIMKEFDE 158


>ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative [Ricinus communis]
           gi|223532263|gb|EEF34066.1| meiotic checkpoint regulator
           cut4, putative [Ricinus communis]
          Length = 1703

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
 Frame = -2

Query: 287 WPLPCGLLLQKAADVSYPAFGPYSASSTSLNARDFPRLKRELGYSPQHNLHA----DHTI 120
           WPLP GLLLQ AA+ S P    + +++  L ARD   L+RE+G+SPQ N+      D+ I
Sbjct: 141 WPLPFGLLLQPAAEGSSPMQSTFLSTNPLLGARDISSLRREIGHSPQQNVTFSNAFDNVI 200

Query: 119 RGDATKLSSHLILKDPLEEPQAILVEERGKLVPMRDLDE 3
           + D   LSSHLILKD LEEPQ+  +EERGKL  M+D DE
Sbjct: 201 KADTVTLSSHLILKDLLEEPQSTYIEERGKLNIMKDFDE 239


>ref|XP_004148181.1| PREDICTED: anaphase-promoting complex subunit 1-like [Cucumis
           sativus]
          Length = 1707

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
 Frame = -2

Query: 287 WPLPCGLLLQKAADVSYPAFGPYSASSTSLNARDFPRLKRELGYSPQHNLHA----DHTI 120
           W  P GLL+++A + + P   P+ +SS  L  RD  R +RE G+SPQ N       DH  
Sbjct: 141 WSFPFGLLMEQAVETNSPVHVPFLSSSPLLGIRDIARARRETGHSPQSNASFSSTFDHVF 200

Query: 119 RGDATKLSSHLILKDPLEEPQAILVEERGKLVPMRDLDE 3
           +GDA+ +S+HLILKDPLE PQ   +EERGKL  M++ DE
Sbjct: 201 KGDASSISTHLILKDPLESPQPAYIEERGKLNIMKEFDE 239


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