BLASTX nr result
ID: Coptis21_contig00040415
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040415 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containi... 108 5e-22 ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [S... 107 1e-21 ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containi... 105 4e-21 emb|CBI24234.3| unnamed protein product [Vitis vinifera] 105 4e-21 emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera] 104 7e-21 >ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein At5g01110-like [Brachypodium distachyon] Length = 651 Score = 108 bits (270), Expect = 5e-22 Identities = 47/76 (61%), Positives = 60/76 (78%) Frame = -1 Query: 229 VAIGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYL 50 VA GCLPD VTYN +LNG+CK +RLS+A+EL NEM RG+ PD CTFTTLIHGYC++G + Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420 Query: 49 EKALNLFRMMIERNLK 2 EKAL F + ++ L+ Sbjct: 421 EKALQFFDTISDQRLR 436 Score = 62.8 bits (151), Expect = 3e-08 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G +P+ +TYN I+ G C+ +S+ + +M + PD T+ TLIHGY KEG + +A Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563 Query: 40 LNLFRMMIERNLK 2 NL ++M N++ Sbjct: 564 FNLLKIMENENVQ 576 Score = 57.8 bits (138), Expect = 9e-07 Identities = 24/69 (34%), Positives = 45/69 (65%) Frame = -1 Query: 211 PDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKALNL 32 PD VTYN +++GMC+ L +A+EL+++M R I P++ T++ LI +C++G ++ A Sbjct: 437 PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAF 496 Query: 31 FRMMIERNL 5 M+ + + Sbjct: 497 LDEMVNKGI 505 Score = 57.4 bits (137), Expect = 1e-06 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = -1 Query: 229 VAIGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYL 50 V+ G P VTYN +L G+ + R +A E+F M G++PD +F LI G+C+ G L Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280 Query: 49 EKALNLFRMMIERNL 5 E+AL ++ M R + Sbjct: 281 EEALRFYKEMRGRRV 295 Score = 56.6 bits (135), Expect = 2e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G +PD V Y +++ G C+ + EA + +EM+ G PD T+ TL++G CKE L A Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388 Query: 40 LNLFRMMIERNL 5 L M ER + Sbjct: 389 EELLNEMKERGV 400 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/69 (37%), Positives = 43/69 (62%) Frame = -1 Query: 211 PDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKALNL 32 PDAVTYN+I++G + EAD ++ +M RGI PD T+ ++I+G+ G +K+ L Sbjct: 577 PDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636 Query: 31 FRMMIERNL 5 M+++ L Sbjct: 637 HDEMLQKGL 645 >ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor] gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor] Length = 649 Score = 107 bits (266), Expect = 1e-21 Identities = 46/76 (60%), Positives = 59/76 (77%) Frame = -1 Query: 229 VAIGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYL 50 V +GCLPD VTYN +LNG+CK RL +A+EL NEM RG++PD CTFTTLIHGYC++G Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNF 418 Query: 49 EKALNLFRMMIERNLK 2 EKAL LF ++ + L+ Sbjct: 419 EKALQLFDTLLHQRLR 434 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = -1 Query: 229 VAIGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYL 50 V+ G LP+ +TYN I+ G C+ + + + +M++ I PD TF TLIHGY KE + Sbjct: 499 VSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENM 558 Query: 49 EKALNLFRMM 20 A N+F +M Sbjct: 559 HGAFNVFNIM 568 Score = 60.5 bits (145), Expect = 1e-07 Identities = 26/72 (36%), Positives = 45/72 (62%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G P VT+N +L G+CK +R +A E+F M + ++PD +F LI G+C+ G +E+A Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281 Query: 40 LNLFRMMIERNL 5 + ++ M +R + Sbjct: 282 MKFYKEMQQRGV 293 Score = 57.8 bits (138), Expect = 9e-07 Identities = 24/67 (35%), Positives = 45/67 (67%) Frame = -1 Query: 211 PDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKALNL 32 PD V YN +++GMC+ L++A+EL+++M R I P++ T++ LI +C++G +E+A Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494 Query: 31 FRMMIER 11 M+ + Sbjct: 495 LDEMVSK 501 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/73 (36%), Positives = 42/73 (57%) Frame = -1 Query: 223 IGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEK 44 +G +PD V Y +++ G C+ +SEA + +EM+ G PD T+ TL++G CK+ L Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD 385 Query: 43 ALNLFRMMIERNL 5 A L M ER + Sbjct: 386 AEELLNEMKERGV 398 Score = 54.7 bits (130), Expect = 8e-06 Identities = 27/67 (40%), Positives = 40/67 (59%) Frame = -1 Query: 211 PDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKALNL 32 PDAVTYN+I+NG + + EA +F +M GI PD T+ +LI+G+ G ++A L Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQL 634 Query: 31 FRMMIER 11 M+ R Sbjct: 635 HDEMMHR 641 >ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein At5g01110-like [Vitis vinifera] Length = 746 Score = 105 bits (262), Expect = 4e-21 Identities = 49/73 (67%), Positives = 58/73 (79%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 GC+ D VTYN ILNG+CK K LSEADELF EM RG+ PD+ TFTTLI+GY K+G + KA Sbjct: 459 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 518 Query: 40 LNLFRMMIERNLK 2 + LF MMI+RNLK Sbjct: 519 VTLFEMMIQRNLK 531 Score = 66.6 bits (161), Expect = 2e-09 Identities = 29/70 (41%), Positives = 48/70 (68%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G LPD +TYN+ILNG + R+ EA+ + +MI RG++PD T+T+LI+G+ + L++A Sbjct: 669 GLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 728 Query: 40 LNLFRMMIER 11 + M++R Sbjct: 729 FRVHDEMLQR 738 Score = 65.1 bits (157), Expect = 6e-09 Identities = 27/70 (38%), Positives = 46/70 (65%) Frame = -1 Query: 211 PDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKALNL 32 PD VTYN +++G CK + + +EL+N+MI R I P++ ++ LI+GYC G + +A L Sbjct: 532 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 591 Query: 31 FRMMIERNLK 2 + M+E+ + Sbjct: 592 WDEMVEKGFE 601 Score = 58.9 bits (141), Expect = 4e-07 Identities = 26/76 (34%), Positives = 43/76 (56%) Frame = -1 Query: 229 VAIGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYL 50 V G + T NI++N +CK +++ ++M +G+ PD T+ TLI+ YC++G L Sbjct: 246 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 305 Query: 49 EKALNLFRMMIERNLK 2 E+A L M + LK Sbjct: 306 EEAFELMDSMSGKGLK 321 Score = 58.2 bits (139), Expect = 7e-07 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G +PD +TYN ++NG K + + A L N+M G+ PD T+ +++G+ ++G +++A Sbjct: 634 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693 Query: 40 LNLFRMMIERNL 5 + MIER + Sbjct: 694 ELIMLKMIERGV 705 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/68 (41%), Positives = 41/68 (60%) Frame = -1 Query: 223 IGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEK 44 IG PD TYNI+L C+ + +A+ +F+EM +G+ PD +F+ LI K G L++ Sbjct: 353 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 412 Query: 43 ALNLFRMM 20 AL FR M Sbjct: 413 ALKYFRDM 420 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/72 (38%), Positives = 43/72 (59%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G PD V Y I++ G C+ +SEA ++ +EM+ +G D T+ T+++G CKE L +A Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483 Query: 40 LNLFRMMIERNL 5 LF M ER + Sbjct: 484 DELFTEMTERGV 495 >emb|CBI24234.3| unnamed protein product [Vitis vinifera] Length = 589 Score = 105 bits (262), Expect = 4e-21 Identities = 49/73 (67%), Positives = 58/73 (79%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 GC+ D VTYN ILNG+CK K LSEADELF EM RG+ PD+ TFTTLI+GY K+G + KA Sbjct: 302 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 361 Query: 40 LNLFRMMIERNLK 2 + LF MMI+RNLK Sbjct: 362 VTLFEMMIQRNLK 374 Score = 66.6 bits (161), Expect = 2e-09 Identities = 29/70 (41%), Positives = 48/70 (68%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G LPD +TYN+ILNG + R+ EA+ + +MI RG++PD T+T+LI+G+ + L++A Sbjct: 512 GLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 571 Query: 40 LNLFRMMIER 11 + M++R Sbjct: 572 FRVHDEMLQR 581 Score = 65.1 bits (157), Expect = 6e-09 Identities = 27/70 (38%), Positives = 46/70 (65%) Frame = -1 Query: 211 PDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKALNL 32 PD VTYN +++G CK + + +EL+N+MI R I P++ ++ LI+GYC G + +A L Sbjct: 375 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 434 Query: 31 FRMMIERNLK 2 + M+E+ + Sbjct: 435 WDEMVEKGFE 444 Score = 58.9 bits (141), Expect = 4e-07 Identities = 26/76 (34%), Positives = 43/76 (56%) Frame = -1 Query: 229 VAIGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYL 50 V G + T NI++N +CK +++ ++M +G+ PD T+ TLI+ YC++G L Sbjct: 89 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 148 Query: 49 EKALNLFRMMIERNLK 2 E+A L M + LK Sbjct: 149 EEAFELMDSMSGKGLK 164 Score = 58.2 bits (139), Expect = 7e-07 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G +PD +TYN ++NG K + + A L N+M G+ PD T+ +++G+ ++G +++A Sbjct: 477 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536 Query: 40 LNLFRMMIERNL 5 + MIER + Sbjct: 537 ELIMLKMIERGV 548 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/68 (41%), Positives = 41/68 (60%) Frame = -1 Query: 223 IGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEK 44 IG PD TYNI+L C+ + +A+ +F+EM +G+ PD +F+ LI K G L++ Sbjct: 196 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 255 Query: 43 ALNLFRMM 20 AL FR M Sbjct: 256 ALKYFRDM 263 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/72 (38%), Positives = 43/72 (59%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G PD V Y I++ G C+ +SEA ++ +EM+ +G D T+ T+++G CKE L +A Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326 Query: 40 LNLFRMMIERNL 5 LF M ER + Sbjct: 327 DELFTEMTERGV 338 >emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera] Length = 850 Score = 104 bits (260), Expect = 7e-21 Identities = 49/73 (67%), Positives = 57/73 (78%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 GC D VTYN ILNG+CK K LSEADELF EM RG+ PD+ TFTTLI+GY K+G + KA Sbjct: 563 GCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKA 622 Query: 40 LNLFRMMIERNLK 2 + LF MMI+RNLK Sbjct: 623 VTLFEMMIQRNLK 635 Score = 66.6 bits (161), Expect = 2e-09 Identities = 29/70 (41%), Positives = 48/70 (68%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G LPD +TYN+ILNG + R+ EA+ + +MI RG++PD T+T+LI+G+ + L++A Sbjct: 773 GLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 832 Query: 40 LNLFRMMIER 11 + M++R Sbjct: 833 FRVHDEMLQR 842 Score = 65.1 bits (157), Expect = 6e-09 Identities = 27/70 (38%), Positives = 46/70 (65%) Frame = -1 Query: 211 PDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKALNL 32 PD VTYN +++G CK + + +EL+N+MI R I P++ ++ LI+GYC G + +A L Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695 Query: 31 FRMMIERNLK 2 + M+E+ + Sbjct: 696 WDEMVEKGFE 705 Score = 58.9 bits (141), Expect = 4e-07 Identities = 26/76 (34%), Positives = 43/76 (56%) Frame = -1 Query: 229 VAIGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYL 50 V G + T NI++N +CK +++ ++M +G+ PD T+ TLI+ YC++G L Sbjct: 350 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 409 Query: 49 EKALNLFRMMIERNLK 2 E+A L M + LK Sbjct: 410 EEAFELMDSMSGKGLK 425 Score = 58.2 bits (139), Expect = 7e-07 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G +PD +TYN ++NG K + + A L N+M G+ PD T+ +++G+ ++G +++A Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797 Query: 40 LNLFRMMIERNL 5 + MIER + Sbjct: 798 ELIMLKMIERGV 809 Score = 57.4 bits (137), Expect = 1e-06 Identities = 28/72 (38%), Positives = 43/72 (59%) Frame = -1 Query: 220 GCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEKA 41 G PD V Y I++ G C+ +SEA ++ +EM+ +G D T+ T+++G CKE L +A Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587 Query: 40 LNLFRMMIERNL 5 LF M ER + Sbjct: 588 DELFTEMTERGV 599 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/68 (41%), Positives = 41/68 (60%) Frame = -1 Query: 223 IGCLPDAVTYNIILNGMCKVKRLSEADELFNEMIRRGISPDYCTFTTLIHGYCKEGYLEK 44 IG PD TYNI+L C+ + +A+ +F+EM +G+ PD +F+ LI K G L++ Sbjct: 457 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 516 Query: 43 ALNLFRMM 20 AL FR M Sbjct: 517 ALKYFRDM 524