BLASTX nr result

ID: Coptis21_contig00040403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040403
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   159   2e-37
gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]        158   5e-37
ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [S...   158   5e-37
ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [S...   158   5e-37
gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indi...   157   7e-37

>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
            gi|296088521|emb|CBI37512.3| unnamed protein product
            [Vitis vinifera]
          Length = 1089

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/84 (88%), Positives = 81/84 (96%)
 Frame = +2

Query: 2    NIPIDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQL 181
            NIPID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTR++SISTPSNSGIMKFAKKQL
Sbjct: 938  NIPIDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQL 997

Query: 182  SCLGCKALISNAEQTLCSHCKGRE 253
            SC+GCKALISN ++TLCSHCKGRE
Sbjct: 998  SCIGCKALISNTDRTLCSHCKGRE 1021


>gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]
          Length = 373

 Score =  158 bits (399), Expect = 5e-37
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = +2

Query: 2   NIPIDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQL 181
           NIPID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTR+VSISTPSNSGIMKFAKKQL
Sbjct: 222 NIPIDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQL 281

Query: 182 SCLGCKALISNAEQTLCSHCKGRE 253
           +CLGCKA+IS A QTLCSHCKGRE
Sbjct: 282 TCLGCKAVISGASQTLCSHCKGRE 305


>ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
            gi|241936293|gb|EES09438.1| hypothetical protein
            SORBIDRAFT_05g005680 [Sorghum bicolor]
          Length = 1099

 Score =  158 bits (399), Expect = 5e-37
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = +2

Query: 2    NIPIDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQL 181
            NIPID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTR+VSISTPSNSGIMKFAKKQL
Sbjct: 948  NIPIDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQL 1007

Query: 182  SCLGCKALISNAEQTLCSHCKGRE 253
            +CLGCKA+IS A QTLCSHCKGRE
Sbjct: 1008 TCLGCKAVISGASQTLCSHCKGRE 1031


>ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
            gi|241931412|gb|EES04557.1| hypothetical protein
            SORBIDRAFT_04g004200 [Sorghum bicolor]
          Length = 1101

 Score =  158 bits (399), Expect = 5e-37
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = +2

Query: 2    NIPIDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQL 181
            NIPID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTR+VSISTPSNSGIMKFAKKQL
Sbjct: 950  NIPIDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQL 1009

Query: 182  SCLGCKALISNAEQTLCSHCKGRE 253
            +CLGCKA+IS A QTLCSHCKGRE
Sbjct: 1010 TCLGCKAVISGASQTLCSHCKGRE 1033


>gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
          Length = 1087

 Score =  157 bits (398), Expect = 7e-37
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = +2

Query: 2    NIPIDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQL 181
            NIPID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTRAVSISTPSNSGIMKFAKKQL
Sbjct: 936  NIPIDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQL 995

Query: 182  SCLGCKALISNAEQTLCSHCKGRE 253
            +CLGCKA+IS + QTLCSHCKGRE
Sbjct: 996  TCLGCKAVISGSNQTLCSHCKGRE 1019


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