BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040377
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [...   121   5e-26
ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   106   2e-21

>ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/81 (71%), Positives = 69/81 (85%)
 Frame = +3

Query: 3   TVTYNTMMNGVCRDITYMLDRAMILTAKLLKMAFVPNVVTVNSLLSHYCKQGMPGKALAW 182
           TVTYNTM++G+C DI   LDRAMILTAKLLKM F+PNV+T N LLSH+CKQGMP KAL W
Sbjct: 737 TVTYNTMLSGICSDI---LDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIW 793

Query: 183 EQKLREVSFPFDDITCKILDR 245
            QKLRE+SF FD+I+ +ILD+
Sbjct: 794 GQKLREISFGFDEISYRILDQ 814


>ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|222835157|gb|EEE73592.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +3

Query: 3   TVTYNTMMNGVCRDITYMLDRAMILTAKLLKMAFVPNVVTVNSLLSHYCKQGMPGKALAW 182
           TVTYNT+MNGVC D+   L+RAMI+TAKLLKMAFVPNVVT N LLSH+CKQGMP K + W
Sbjct: 639 TVTYNTVMNGVCTDV---LERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMW 695

Query: 183 EQKLREVSFPFDDITCKILDR 245
            QKL E+SF FD+I+ K++DR
Sbjct: 696 GQKLNEISFGFDEISIKLMDR 716


>ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 581

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   TVTYNTMMNGVCRDITYMLDRAMILTAKLLKMAFVPNVVTVNSLLSHYCKQGMPGKALAW 182
           TVTYNTM++G+C DI   LD AMI TAKLLKM F+PNV+T N LLSH+CKQGMP KAL W
Sbjct: 480 TVTYNTMLSGICSDI---LDHAMIFTAKLLKMGFLPNVITTNMLLSHFCKQGMPEKALIW 536

Query: 183 EQKLREVSFPFDDITCKILDR 245
            QKLRE+SF FD+I+ +I+D+
Sbjct: 537 GQKLREISFDFDEISYQIMDQ 557


>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  108 bits (270), Expect = 4e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%)
 Frame = +3

Query: 3   TVTYNTMMNGVCRDITYMLDRAMILTAKLLKMAFVPNVVTVNSLLSHYCKQGMPGKALAW 182
           TVTYN+M+NGVC DI   LDRAMILTA+LLKMAFVPNVVT N LLS + KQGMP + L W
Sbjct: 756 TVTYNSMLNGVCSDI---LDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMW 812

Query: 183 EQKLREVSFPFDDITCKILDR 245
             KL E+ + FD+IT KI+D+
Sbjct: 813 GHKLSEIPYAFDEITYKIMDK 833


>ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/81 (66%), Positives = 62/81 (76%)
 Frame = +3

Query: 3   TVTYNTMMNGVCRDITYMLDRAMILTAKLLKMAFVPNVVTVNSLLSHYCKQGMPGKALAW 182
           TVTYNTM+N VC  I   LD AMILTAKLLKMAFVPN VTVN LLS +CKQGMP KA+ W
Sbjct: 747 TVTYNTMINAVCNVI---LDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFW 803

Query: 183 EQKLREVSFPFDDITCKILDR 245
            QKL E+   FD+ T K+++R
Sbjct: 804 GQKLSEIHLDFDETTHKLMNR 824