BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040374
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22109.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...   102   2e-20
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...    77   2e-12

>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/117 (46%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = +1

Query: 130 VSRMWPYVAILSKYVNGYQLVVTQASTGDHKVTDGVLSRLIAEEENDPVFYKET-CTAYI 306
           VS + P+ AILSK +  YQ + T+AS  +  V D  L+ ++++ E  P F  E  CT YI
Sbjct: 46  VSWILPFFAILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYI 105

Query: 307 ERLCRLDNVSDTARLLQSLHNKHIFLGPRTYNLLLTVVHEGKDFELLSKIFKDALVS 477
           ++L +  N S  AR +QSLH+KHIFL P  YNLLL    E    + LS+IFKD LVS
Sbjct: 106 DKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVS 162


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/117 (46%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = +1

Query: 130 VSRMWPYVAILSKYVNGYQLVVTQASTGDHKVTDGVLSRLIAEEENDPVFYKET-CTAYI 306
           VS + P+ AILSK +  YQ + T+AS  +  V D  L+ ++++ E  P F  E  CT YI
Sbjct: 17  VSWILPFFAILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYI 76

Query: 307 ERLCRLDNVSDTARLLQSLHNKHIFLGPRTYNLLLTVVHEGKDFELLSKIFKDALVS 477
           ++L +  N S  AR +QSLH+KHIFL P  YNLLL    E    + LS+IFKD LVS
Sbjct: 77  DKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVS 133


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
 Frame = +1

Query: 133 SRMWPYVAILSKYVNGYQLVVTQASTGDHKVTDGVLSRLIAEEENDPVFY-KETCTAYIE 309
           S++ P++A +++ ++  + + T+ S  + +V D  L+++I   EN P    ++  TAY+ 
Sbjct: 12  SQISPHLATITEVIDHCKRLTTRVSFDEGEVKDDNLNQMINAVENAPESATRKIGTAYVH 71

Query: 310 RLCRLDNVSDTARLLQSLHNKHIFLGPRTYNLLLTVVHEGKDFELLSKIFKDALVSCNFL 489
            LC+  N+    RLLQSL +K+IFLGP  YN++L    E  D  +LS++FKD +VSC  L
Sbjct: 72  NLCKAGNLFTAVRLLQSLCDKNIFLGPSAYNIILVAASEKNDIAILSQVFKDLIVSCQSL 131


>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/125 (32%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
 Frame = +1

Query: 106 CLPTARLGVSRMWPYVAILSKYVNGYQLVVTQASTGDHKVTDGVLSRLIAEEENDP-VFY 282
           C+ +  +G   + P+ A +++ +  Y+ + T+AS    ++ D  L++++   EN P    
Sbjct: 33  CITSIPVGSHWILPHFATITEVIGHYKQLTTRASFDGEEIKDDNLNQMLEAVENAPECTT 92

Query: 283 KETCTAYIERLCRLDNVSDTARLLQSLHNKHIFLGPRTYNLLLTVVHEGKDFELLSKIFK 462
           ++  TAY+  LC+   +    RLL+ L +K+IFLGP  YN++L    E  D E+LS++FK
Sbjct: 93  RKVGTAYVHNLCKAGTLFAAVRLLRLLRDKNIFLGPSAYNIILVTASEKNDVEILSQVFK 152

Query: 463 DALVS 477
           D ++S
Sbjct: 153 DLILS 157


>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/97 (36%), Positives = 59/97 (60%)
 Frame = +1

Query: 199 QASTGDHKVTDGVLSRLIAEEENDPVFYKETCTAYIERLCRLDNVSDTARLLQSLHNKHI 378
           +AS  + +V +  L+ ++A  +N P   +E CT Y+ +LC   ++    RLLQSL N++I
Sbjct: 88  KASLNEDEVAEAYLNIILAAIQNAPSSIEEICTGYLHKLCNSGSLFVAVRLLQSLQNRNI 147

Query: 379 FLGPRTYNLLLTVVHEGKDFELLSKIFKDALVSCNFL 489
            LGP  YNL++    E    +++S++FKD ++SC  L
Sbjct: 148 TLGPNAYNLVMEAAGEANKADIVSRVFKDLMMSCKSL 184