BLASTX nr result

ID: Coptis21_contig00040358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040358
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529883.1| transcription factor, putative [Ricinus comm...   132   2e-29
ref|XP_002271515.2| PREDICTED: probable lysine-specific demethyl...   132   3e-29
emb|CBI39010.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_003630007.1| Lysine-specific demethylase 5A [Medicago tru...   123   1e-26
ref|XP_003591723.1| Lysine-specific demethylase 5A [Medicago tru...   123   2e-26

>ref|XP_002529883.1| transcription factor, putative [Ricinus communis]
           gi|223530610|gb|EEF32486.1| transcription factor,
           putative [Ricinus communis]
          Length = 935

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/107 (62%), Positives = 82/107 (76%)
 Frame = -1

Query: 322 MGASRRRTSLEGSEPSECAASDTDEKFGFHSGPDFTLYDFQRYANDFKECYFGIQDRMDD 143
           MGASRRR +   S     AAS+ DEKFGF SG DFTL +FQ+YA+ FK CYFG+ D M+D
Sbjct: 136 MGASRRRAT---SCSEANAASEADEKFGFQSGSDFTLEEFQKYADHFKACYFGVMDSMED 192

Query: 142 TKPTSVEPRKSGIPSIEDIEGEYWRIVEKPSEEVEVYYGADLETGIF 2
            KP  +E +K   PS+E+IEGEYWRI+E+P++EVEVYYGADLETG F
Sbjct: 193 VKP-GIEHQKLE-PSVEEIEGEYWRIIEQPTDEVEVYYGADLETGTF 237


>ref|XP_002271515.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1118

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/107 (61%), Positives = 79/107 (73%)
 Frame = -1

Query: 322 MGASRRRTSLEGSEPSECAASDTDEKFGFHSGPDFTLYDFQRYANDFKECYFGIQDRMDD 143
           MG +RR +  E SE +    SD+DEKFGFHSG DFTL +FQ++A+ FKE YFGI+D  D+
Sbjct: 176 MGTTRRHSRSEVSEAN--IVSDSDEKFGFHSGSDFTLEEFQKHADSFKEFYFGIKDAKDN 233

Query: 142 TKPTSVEPRKSGIPSIEDIEGEYWRIVEKPSEEVEVYYGADLETGIF 2
                VE  K   PS+EDIEGEYWRIVEKP++EVEVYYGADLET  F
Sbjct: 234 LNSDGVECNKRWEPSVEDIEGEYWRIVEKPTDEVEVYYGADLETEAF 280


>emb|CBI39010.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/107 (61%), Positives = 79/107 (73%)
 Frame = -1

Query: 322 MGASRRRTSLEGSEPSECAASDTDEKFGFHSGPDFTLYDFQRYANDFKECYFGIQDRMDD 143
           MG +RR +  E SE +    SD+DEKFGFHSG DFTL +FQ++A+ FKE YFGI+D  D+
Sbjct: 222 MGTTRRHSRSEVSEAN--IVSDSDEKFGFHSGSDFTLEEFQKHADSFKEFYFGIKDAKDN 279

Query: 142 TKPTSVEPRKSGIPSIEDIEGEYWRIVEKPSEEVEVYYGADLETGIF 2
                VE  K   PS+EDIEGEYWRIVEKP++EVEVYYGADLET  F
Sbjct: 280 LNSDGVECNKRWEPSVEDIEGEYWRIVEKPTDEVEVYYGADLETEAF 326


>ref|XP_003630007.1| Lysine-specific demethylase 5A [Medicago truncatula]
           gi|355524029|gb|AET04483.1| Lysine-specific demethylase
           5A [Medicago truncatula]
          Length = 1042

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
 Frame = -1

Query: 322 MGASRRRTSLEGSEPSECAASDTDEKFGFHSGPDFTLYDFQRYANDFKECYFGIQDRMDD 143
           MG   RRT    SE +  A S++D+ FGF SGPDFTL +FQ+Y N FK+CYFG+ D  D 
Sbjct: 121 MGTCNRRTGNSCSEAN--ATSESDDTFGFQSGPDFTLKEFQQYGNSFKDCYFGLSDAKDG 178

Query: 142 T-KPTSVEPRKSGIPSIEDIEGEYWRIVEKPSEEVEVYYGADLETG 8
                ++  R+   PS+EDIEGEYWRI+EKP++EVEVYYGADLETG
Sbjct: 179 KGSDNNLHERRQ--PSLEDIEGEYWRIIEKPTDEVEVYYGADLETG 222


>ref|XP_003591723.1| Lysine-specific demethylase 5A [Medicago truncatula]
           gi|358344555|ref|XP_003636354.1| Lysine-specific
           demethylase 5A [Medicago truncatula]
           gi|355480771|gb|AES61974.1| Lysine-specific demethylase
           5A [Medicago truncatula] gi|355502289|gb|AES83492.1|
           Lysine-specific demethylase 5A [Medicago truncatula]
          Length = 1000

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/102 (57%), Positives = 74/102 (72%)
 Frame = -1

Query: 307 RRTSLEGSEPSECAASDTDEKFGFHSGPDFTLYDFQRYANDFKECYFGIQDRMDDTKPTS 128
           RR S   SE +   AS+ DEK+GF +G DFT  DFQ+YA+ FKECYFG++D  +D K   
Sbjct: 141 RRASKSASEANN--ASEADEKYGFQAGSDFTFKDFQQYASHFKECYFGLKDANEDGKVND 198

Query: 127 VEPRKSGIPSIEDIEGEYWRIVEKPSEEVEVYYGADLETGIF 2
              +    PS E+IEGEYWRIVE+P++EVEVYYGADLETG+F
Sbjct: 199 SNHQNRREPSEEEIEGEYWRIVEQPTDEVEVYYGADLETGVF 240


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