BLASTX nr result

ID: Coptis21_contig00040357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040357
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271172.1| PREDICTED: transcription factor bHLH120 [Vit...    93   3e-17
ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit...    83   3e-14

>ref|XP_002271172.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084087|emb|CBI24475.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   ATHYVRHQQKKIKELLDRRDGLKRMLNSSTPNVENRN--FCSPNCVMVQPSFAGLEIIIG 175
           A +Y+   Q KI++L ++RD LKR  N S  ++E+R+   C PNCV+V P   G+EI++ 
Sbjct: 79  AVNYINDLQMKIQDLGNKRDALKRQCNMSASHLESRSSEICPPNCVVVSPCLGGVEILVS 138

Query: 176 CSLKTPSLPLSKVLGVLIEEGLGVISYASTTVNEISFHFIQSEVISPNTVNIPVLQDKLI 355
              +   L LS+V+ +L EE L V+S  ST VNE   H I  +V  P+ V++ +LQ KL+
Sbjct: 139 GGFREEGL-LSRVMELLFEERLSVVSCVSTKVNEGLLHTINCKVADPSCVDLSMLQQKLL 197

Query: 356 D 358
           D
Sbjct: 198 D 198


>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   ATHYVRHQQKKIKELLDRRDGLKRMLNSS--TPNVENRNFCSPNCVMVQPSFAGLEIIIG 175
           + +Y+++ QKKIKEL  +RDGLK+  N S  +P+  +  +   + V +QP   G+E++  
Sbjct: 116 SVNYIKYLQKKIKELSAKRDGLKKSPNLSFDSPSGSSNKYSPISPVTLQPYPGGIEVVFD 175

Query: 176 CSLKTPSLPLSKVLGVLIEEGLGVISYASTTVNEISFHFIQSEVISPNTVNIPVLQDKL 352
              +    PLS+VL VL+EEG+ V++  ST VNE  FH +Q+EV  P  +N+  L+ KL
Sbjct: 176 SDFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACLNLSELRQKL 234


>ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|222846833|gb|EEE84380.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/115 (42%), Positives = 75/115 (65%)
 Frame = +2

Query: 8   HYVRHQQKKIKELLDRRDGLKRMLNSSTPNVENRNFCSPNCVMVQPSFAGLEIIIGCSLK 187
           +Y++HQ++KI++L+D++D LKR L++S+  +EN   C  + + V+    G+E+ I  +LK
Sbjct: 124 YYIKHQEEKIQKLIDKKDELKRYLSTSSA-LENLEGCERDTLTVRTRCVGVEVDINTALK 182

Query: 188 TPSLPLSKVLGVLIEEGLGVISYASTTVNEISFHFIQSEVISPNTVNIPVLQDKL 352
               PLS+VL +LIEEG  V+S  ST VNE   H I SEV    +++I  LQ KL
Sbjct: 183 K-GFPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISEVTDGRSLDISELQQKL 236


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   ATHYVRHQQKKIKELLDRRDGLKRMLNSSTPNVEN--RNFCSPNCVMVQPSFAGLEIIIG 175
           A +Y+++ QKKIKE   +RD LK++ + S+    +   N  S + V +QP   G+EI   
Sbjct: 116 AVNYIKYLQKKIKETSAKRDELKKLSDFSSVASPSGCSNKSSSSSVALQPYPGGIEITFD 175

Query: 176 CSLKTPSLPLSKVLGVLIEEGLGVISYASTTVNEISFHFIQSEVISPNTVNIPVLQDKL 352
             L    LPLS+VL VL+EEG+ VI+  ST VNE  FH +Q+EV  P  +N+  L  KL
Sbjct: 176 SDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQTEVNDPTCLNLSELWQKL 234


>ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084088|emb|CBI24476.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/119 (41%), Positives = 70/119 (58%)
 Frame = +2

Query: 2   ATHYVRHQQKKIKELLDRRDGLKRMLNSSTPNVENRNFCSPNCVMVQPSFAGLEIIIGCS 181
           A +Y++H QKKIKEL ++R+ LK + NSS+ N       S N V V P + G+EI++   
Sbjct: 114 AVNYIKHLQKKIKELGEKRNELKSLANSSSRN------SSGNFVTVCPCWGGVEIVVSSG 167

Query: 182 LKTPSLPLSKVLGVLIEEGLGVISYASTTVNEISFHFIQSEVISPNTVNIPVLQDKLID 358
            +   +PLS+ L  L+EEGL VIS  ST VN    H I  EV    ++++  LQ +L D
Sbjct: 168 GEKEGMPLSRALETLLEEGLSVISCISTKVNGRLLHTIHCEVSDITSIDLHGLQQQLSD 226


Top