BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040326
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002319949.1| f-box family protein [Populus trichocarpa] g...    59   3e-07
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    57   1e-06
dbj|BAK03202.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   1e-06

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/100 (41%), Positives = 63/100 (63%)
 Frame = +1

Query: 1   HIVSFLPTEDAVKTSILSRQWRNVCFSLTNYNYDQSSFEEKNQTKEDLKNAVDHLLMNRD 180
           HI+SFL T+DAV+TSILSR+W ++  SL+N  + Q  F+ K   ++   N+V+ +L+ RD
Sbjct: 50  HILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYFKAK---RKIFMNSVERVLLLRD 106

Query: 181 RSDIRQFRLRLSIDEKLITEVHTNTWISFAIRHSVIELSI 300
            S+I +F L   ID+       T TW+S A+  +V EL +
Sbjct: 107 SSNIEKFTLSCGIDD----ATRTRTWVSAAVNRNVKELCV 142


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
 Frame = +1

Query: 1   HIVSFLPTEDAVKTSILSRQWRNVCFSLTNYNYDQSSFEEKNQTKED------LKNAVDH 162
           HI+SFLPT+ AV TS+LS++WR +  S+ N ++D     ++++   D       KN VD 
Sbjct: 22  HIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSICFKNFVDK 81

Query: 163 LLMNRDRSDIRQFRLRLSIDEKLITEVHTNTWISFAIRHSVIELSIY 303
           +L++   S IR+FRL+ S D +L + V  N+WI  A+  +V EL +Y
Sbjct: 82  VLLHGSISCIRKFRLKCS-DHELDSAV--NSWICTALERNVQELDLY 125


>ref|XP_002319949.1| f-box family protein [Populus trichocarpa]
           gi|222858325|gb|EEE95872.1| f-box family protein
           [Populus trichocarpa]
          Length = 340

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   HIVSFLPTEDAVKTSILSRQWRNVCFSLTNYNYDQSSFEEKNQ---TKEDLKNAVDHLLM 171
           HI+SFLPT D + TS++S +W+ +   + + N+  + F   N    T++     +D  L+
Sbjct: 37  HILSFLPTLDTITTSLISTKWKPLWSLVPSLNFSYTHFPPYNNFSTTRQFFSEFIDRTLI 96

Query: 172 NRDRSDIRQFRLRLSIDEKLITEVHTNTWISFAIRHSVIELSI 300
            + +  +++FRL    +++     H ++W+ +AI++ V+EL +
Sbjct: 97  LKPQLPLKKFRLEFIYEDRY--GYHVDSWVRYAIKNQVLELDL 137


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = +1

Query: 4   IVSFLPTEDAVKTSILSRQWRNVCFSLTNYNYDQSSFEEKNQ-TKEDLKNAVDHLLMNRD 180
           ++SFLPT+DAV TS+LS++W  +   +T  ++D   +   N+  K    + VD +L+  +
Sbjct: 40  VLSFLPTKDAVSTSVLSKRWIYLWTFITKLDFDDIGYCSSNEIRKACFVDFVDRVLLRLN 99

Query: 181 RSDIRQFRLRLSIDEKLITEVHTNTWISFAIRHSVIELSIY 303
              IR F L++S  EK  +  + N WIS  I   V +L +Y
Sbjct: 100 SEHIRSFSLKMS--EKYDSS-YINKWISIVINLRVRKLRVY 137


>dbj|BAK03202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 451

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
 Frame = +1

Query: 1   HIVSFLPTEDAVKTSILSRQWRNVCFSLTNYNYDQSSFEEKNQTKEDLKNAVDHLLMNRD 180
           H++SFLP + AV+T +L+ +WR++  S T         EE     +D++  VDHLL+ R+
Sbjct: 72  HMLSFLPAQAAVRTCVLAHRWRHLWRSTTGLRIGGLDDEESVHV-QDIRKFVDHLLILRE 130

Query: 181 RSDIRQFRLR----LSIDEKLITEVHTNTWISFAIRHSVIELSIY 303
           R+D+    ++    L  DE      + N WI FA+ + V  L+++
Sbjct: 131 RTDLDTVEIKFHEFLGDDEP-----YVNLWIRFAVMNKVRVLTLH 170