BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040299
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002321990.1| f-box family protein [Populus trichocarpa] g...    56   4e-06
ref|XP_003614107.1| F-box family protein [Medicago truncatula] g...    55   5e-06
ref|XP_003614104.1| F-box family protein [Medicago truncatula] g...    55   5e-06
ref|XP_003592943.1| F-box/LRR-repeat protein [Medicago truncatul...    55   5e-06

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
 Frame = +2

Query: 14  DRISTLHDNILIEIFSLLDMKYAVQASIYGLRWTDLWATLPTLNFDSRILNERTPKDGRK 193
           DRIS L D +L  I S L  K+AV  S+   RW  LWA++P L+FD  +L +R    G  
Sbjct: 10  DRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDS 69

Query: 194 SR---FEKFVNEVFIQHDTSDLQK 256
            R   F+ FV++V +    S ++K
Sbjct: 70  ERSICFKNFVDKVLLHGSISCIRK 93


>ref|XP_002321990.1| f-box family protein [Populus trichocarpa]
           gi|222868986|gb|EEF06117.1| f-box family protein
           [Populus trichocarpa]
          Length = 356

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/82 (32%), Positives = 48/82 (58%)
 Frame = +2

Query: 11  EDRISTLHDNILIEIFSLLDMKYAVQASIYGLRWTDLWATLPTLNFDSRILNERTPKDGR 190
           +DR+S L D I+ EI   L++  A++ S+   RW +LWA++P LNF+S+   E+T     
Sbjct: 9   QDRLSDLPDYIIHEILCFLEINQAIRTSVLSERWKNLWASVPDLNFNSKSFTEQT----- 63

Query: 191 KSRFEKFVNEVFIQHDTSDLQK 256
              F KF+  V  + +  ++++
Sbjct: 64  ---FPKFLRRVMSKREDCNVRR 82


>ref|XP_003614107.1| F-box family protein [Medicago truncatula]
           gi|355515442|gb|AES97065.1| F-box family protein
           [Medicago truncatula]
          Length = 439

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/78 (38%), Positives = 39/78 (50%)
 Frame = +2

Query: 11  EDRISTLHDNILIEIFSLLDMKYAVQASIYGLRWTDLWATLPTLNFDSRILNERTPKDGR 190
           +D +S   D IL+ I S LD KYAVQ  +   RW +LW  +PTL   S        K   
Sbjct: 29  DDMLSNFPDGILLHILSFLDAKYAVQTCVLSTRWRNLWKLIPTLILHS-------SKFST 81

Query: 191 KSRFEKFVNEVFIQHDTS 244
             +F KFV ++    DTS
Sbjct: 82  LKQFSKFVPKILTLRDTS 99


>ref|XP_003614104.1| F-box family protein [Medicago truncatula]
           gi|355515439|gb|AES97062.1| F-box family protein
           [Medicago truncatula]
          Length = 439

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/78 (38%), Positives = 39/78 (50%)
 Frame = +2

Query: 11  EDRISTLHDNILIEIFSLLDMKYAVQASIYGLRWTDLWATLPTLNFDSRILNERTPKDGR 190
           +D +S   D IL+ I S LD KYAVQ  +   RW +LW  +PTL   S        K   
Sbjct: 29  DDMLSNFPDGILLHILSFLDAKYAVQTCVLSTRWRNLWKLIPTLILHS-------SKFST 81

Query: 191 KSRFEKFVNEVFIQHDTS 244
             +F KFV ++    DTS
Sbjct: 82  LKQFSKFVPKILTLRDTS 99


>ref|XP_003592943.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355481991|gb|AES63194.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +2

Query: 14  DRISTLHDNILIEIFSLLDMKYAVQASIYGLRWTDLWATLPTLNF-DSRILNERTPKDGR 190
           DRI +L D ILI I S +  K A   SI   RWT LW  +P L+F D+++ N        
Sbjct: 11  DRIGSLPDEILIHILSFVPTKQAFVTSILSKRWTHLWCFVPNLDFSDTKLKNGED----- 65

Query: 191 KSRFEKFVNEVFIQHD 238
            SRF  FVN VF   D
Sbjct: 66  SSRFSNFVNTVFHSQD 81