BLASTX nr result

ID: Coptis21_contig00040273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040273
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX82526.1| S-locus F-box-like protein a [Petunia integrifoli...    55   8e-06

>gb|ABX82526.1| S-locus F-box-like protein a [Petunia integrifolia subsp. inflata]
          Length = 387

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
 Frame = +2

Query: 29  SNVFVNGYLHWLGEDCLENFVNLIFSMSTEEFSIIQPPLAINL----IYGDQELVVLDEH 196
           S +F NG  HW G    E  V L F MSTE F  ++ P A +      YG   LVVL++ 
Sbjct: 219 SEMFYNGATHWFGRT--ETVVILCFDMSTETFRNMKMPDACHFKDRKSYG---LVVLNDS 273

Query: 197 L---------CLVRFSRDQLDVWKMKDHGNKNSWTQEYCLS 292
           L         C++  ++D +++W MK++G   SW ++Y ++
Sbjct: 274 LTLICYRHPGCIIDLTKDFMEIWTMKEYGVGESWIKKYTIT 314


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