BLASTX nr result

ID: Coptis21_contig00040259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040259
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon...    56   3e-06

>ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera]
           gi|298204407|emb|CBI16887.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +2

Query: 20  MANR-VSTNLQQNIPSFLKSLNSSPSTYTAVTTPLNLTEELENXXXXXXXXXXX---SHK 187
           MANR VS +   N+  F+++L+SSPS+ T V+ PLNL E+ E               S  
Sbjct: 1   MANRLVSPSKFLNLRCFVRTLHSSPSSITDVS-PLNLAEKPEETTLLSPTFATGATSSTS 59

Query: 188 TLSLDDGEXXXXXXXXXXXXXXXXNLQMASFDPIVDMGTWVMKSRLME 331
           T+ L D +                NL +A+ +P+VD+G WVMKSR++E
Sbjct: 60  TIDLHDVKGLFSSMSTAKLLRSSVNLHLATLEPMVDVGMWVMKSRVLE 107


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