BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040253
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. l...    81   1e-13
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
emb|CBI30968.3| unnamed protein product [Vitis vinifera]               79   3e-13
emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera]    79   3e-13

>ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 595

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = -2

Query: 247 LASLAACELVLFDPDDSGDVVILSNVYSKLRRWEDVERLRK-----GTRKSPGHSFIEVD 83
           LA LA  +++  +P+ SGD V+LSN+Y+  +RW DV+++RK     G RK PGHS +EV 
Sbjct: 410 LAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVG 469

Query: 82  NDVHEFFMRDNFHPQIEEI 26
           N VHEF M D  HPQ + I
Sbjct: 470 NRVHEFLMGDKSHPQNDMI 488


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
 Frame = -2

Query: 247 LASLAACELVLFDPDDSGDVVILSNVYSKLRRWEDVERLRK-----GTRKSPGHSFIEVD 83
           LA  AA +++  +P+D+G  ++LSN+Y+  +RWEDV  +RK     G RK+PG S+IEVD
Sbjct: 438 LAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVD 497

Query: 82  NDVHEFFMRDNFHPQIEEICLLVNKI 5
             +H F + D  HP+IEEI   +N +
Sbjct: 498 KQIHVFILGDTSHPKIEEIVQRLNDL 523


>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
 Frame = -2

Query: 247 LASLAACELVLFDPDDSGDVVILSNVYSKLRRWEDVER-----LRKGTRKSPGHSFIEVD 83
           L  +A  +L+  +P  SGD V+LSN+Y+  +RW DV +     LR+G +K+PGHS +E+ 
Sbjct: 428 LGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELR 487

Query: 82  NDVHEFFMRDNFHPQIEEICLLVNKI 5
           N +HEF M D  HPQ EEI + + +I
Sbjct: 488 NRLHEFVMGDRSHPQTEEIYVKLAEI 513


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
 Frame = -2

Query: 247 LASLAACELVLFDPDDSGDVVILSNVYSKLRRWEDVER-----LRKGTRKSPGHSFIEVD 83
           L  +A  +L+  +P  SGD V+LSN+Y+  +RW DV +     LR+G +K+PGHS +E+ 
Sbjct: 283 LGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELR 342

Query: 82  NDVHEFFMRDNFHPQIEEICLLVNKI 5
           N +HEF M D  HPQ EEI + + +I
Sbjct: 343 NRLHEFVMGDRSHPQTEEIYVKLAEI 368


>emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera]
          Length = 348

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
 Frame = -2

Query: 247 LASLAACELVLFDPDDSGDVVILSNVYSKLRRWEDVER-----LRKGTRKSPGHSFIEVD 83
           L  +A  +L+  +P  SGD V+LSN+Y+  +RW DV +     LR+G +K+PGHS +E+ 
Sbjct: 163 LGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELR 222

Query: 82  NDVHEFFMRDNFHPQIEEICLLVNKI 5
           N +HEF M D  HPQ EEI + + +I
Sbjct: 223 NRLHEFVMGDRSHPQTEEIYVKLAEI 248