BLASTX nr result

ID: Coptis21_contig00040250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040250
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ27771.1| hypothetical protein OsJ_11719 [Oryza sativa Japo...    78   8e-13
gb|EAY90988.1| hypothetical protein OsI_12598 [Oryza sativa Indi...    78   8e-13
gb|AAR00613.1| unknown protein [Oryza sativa Japonica Group] gi|...    74   9e-12
emb|CAN72175.1| hypothetical protein VITISV_012535 [Vitis vinifera]    72   6e-11
emb|CBI19580.3| unnamed protein product [Vitis vinifera]               71   1e-10

>gb|EAZ27771.1| hypothetical protein OsJ_11719 [Oryza sativa Japonica Group]
          Length = 296

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
 Frame = -3

Query: 303 YTWLEVKSSHVP--------FQIVLVMWDEIAEIALKHLKRNDYIYVSGKLRSYTKVDLS 148
           YT+L V SS           F++ L +  E+A ++LKHLK+ND +YVSG L SY KVD S
Sbjct: 82  YTFLSVSSSPSSPPSSSPSNFRVTLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPS 141

Query: 147 GRSEMFYKVYVNELNFVACTG-RSQSIQKSEPKEGAISTSGVLDLEKK 7
           G    FYK++V +LN+V     R Q+ + S  K   +ST+  +  EKK
Sbjct: 142 GEKHTFYKIHVTDLNYVLDQNQRPQNDENSSDKSSMLSTTDEILTEKK 189


>gb|EAY90988.1| hypothetical protein OsI_12598 [Oryza sativa Indica Group]
          Length = 296

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
 Frame = -3

Query: 303 YTWLEVKSSHVP--------FQIVLVMWDEIAEIALKHLKRNDYIYVSGKLRSYTKVDLS 148
           YT+L V SS           F++ L +  E+A ++LKHLK+ND +YVSG L SY KVD S
Sbjct: 82  YTFLSVSSSPSSPPSSSPSNFRVTLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPS 141

Query: 147 GRSEMFYKVYVNELNFVACTG-RSQSIQKSEPKEGAISTSGVLDLEKK 7
           G    FYK++V +LN+V     R Q+ + S  K   +ST+  +  EKK
Sbjct: 142 GEKHTFYKIHVTDLNYVLDQNQRPQNDENSSDKSSMLSTTDEILTEKK 189


>gb|AAR00613.1| unknown protein [Oryza sativa Japonica Group]
           gi|108709797|gb|ABF97592.1| Single-strand binding
           protein family protein, expressed [Oryza sativa Japonica
           Group]
          Length = 183

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
 Frame = -3

Query: 303 YTWLEVKSSHVP--------FQIVLVMWDEIAEIALKHLKRNDYIYVSGKLRSYTKVDLS 148
           YT+L V SS           F++ L +  E+A ++LKHLK+ND +YVSG L SY KVD S
Sbjct: 82  YTFLSVSSSPSSPPSSSPSNFRVTLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPS 141

Query: 147 GRSEMFYKVYVNELNFVACTG-RSQSIQKSEPKEGAISTS 31
           G    FYK++V +LN+V     R Q+ + S  K   +ST+
Sbjct: 142 GEKHTFYKIHVTDLNYVLDQNQRPQNDENSSDKSSMLSTT 181


>emb|CAN72175.1| hypothetical protein VITISV_012535 [Vitis vinifera]
          Length = 273

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
 Frame = -3

Query: 303 YTWLEVK---SSHVPFQIVLVMWDEIAEIALKHLKRNDYIYVSGKLRSYTKVDLSGRSEM 133
           YT L VK    +    +I L MWD +AEI+ KHLK+ND I+VSG L  YTK D +G+   
Sbjct: 95  YTXLHVKPFREARRDVRIFLQMWDRMAEISFKHLKQNDLIHVSGHLGFYTKADDNGQLRP 154

Query: 132 FYKVYVNELNFVACTGRSQSIQKSEPKE 49
           ++KV V ELN+V   G+  + +K E  E
Sbjct: 155 YHKVIVKELNYVTQFGQPPTYKKIENLE 182


>emb|CBI19580.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
 Frame = -3

Query: 303 YTWLEVK---SSHVPFQIVLVMWDEIAEIALKHLKRNDYIYVSGKLRSYTKVDLSGRSEM 133
           YT L VK    +    +I L MWD +AEI+ KHLK+ND I+VSG L  YTK D +G+   
Sbjct: 95  YTVLHVKPFREARRDVRIFLQMWDRMAEISFKHLKQNDLIHVSGHLGFYTKADDNGQLRP 154

Query: 132 FYKVYVNELNFVACTGRSQSIQKSEPKE 49
           ++KV V ELN+V   G+  + +K E  E
Sbjct: 155 YHKVIVKELNYVTQFGQPPTYKKIENLE 182


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