BLASTX nr result

ID: Coptis21_contig00040246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040246
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139888.1| PREDICTED: callose synthase 7-like [Cucumis ...   160   1e-37
ref|XP_004159034.1| PREDICTED: LOW QUALITY PROTEIN: callose synt...   158   5e-37
ref|XP_002300874.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_002889606.1| hypothetical protein ARALYDRAFT_470669 [Arab...   143   2e-32
gb|ADK87343.1| callose synthase 7 [Arabidopsis thaliana]              142   4e-32

>ref|XP_004139888.1| PREDICTED: callose synthase 7-like [Cucumis sativus]
          Length = 1945

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/120 (64%), Positives = 96/120 (80%)
 Frame = +2

Query: 2   KTVVPDGRVEEEVNRYAREVEKKKEHYTPYNILPLDALGTPPAIMELPEIKAALHALRKV 181
           KTVVP  +++E+  +YA+EV++KKE +  YNILPL AL   PAIMELPEI+AA+ AL+KV
Sbjct: 160 KTVVPPSKIDEKTEQYAKEVQRKKEQHEHYNILPLFALAVKPAIMELPEIEAAIEALQKV 219

Query: 182 DNLPKPMVQSTNNGQDSSSRPEEGSKPVNDLLDWLWLTFGFQKGNVANQREHLILLLANV 361
           +NLP P + ST+N  ++ SRP E  KPVND+LDWL   FGFQKGNVANQREHLILLLAN+
Sbjct: 220 NNLPMPKIHSTSNPDENPSRPTERVKPVNDILDWLSSIFGFQKGNVANQREHLILLLANI 279


>ref|XP_004159034.1| PREDICTED: LOW QUALITY PROTEIN: callose synthase 7-like [Cucumis
           sativus]
          Length = 1930

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/120 (63%), Positives = 95/120 (79%)
 Frame = +2

Query: 2   KTVVPDGRVEEEVNRYAREVEKKKEHYTPYNILPLDALGTPPAIMELPEIKAALHALRKV 181
           KTVVP  +++E+  +YA+EV++ KE +  YNILPL AL   PAIMELPEI+AA+ AL+KV
Sbjct: 160 KTVVPPSKIDEKTEQYAKEVQRXKEQHEHYNILPLFALAVKPAIMELPEIEAAIEALQKV 219

Query: 182 DNLPKPMVQSTNNGQDSSSRPEEGSKPVNDLLDWLWLTFGFQKGNVANQREHLILLLANV 361
           +NLP P + ST+N  ++ SRP E  KPVND+LDWL   FGFQKGNVANQREHLILLLAN+
Sbjct: 220 NNLPMPKIHSTSNPDENPSRPTERVKPVNDILDWLSSIFGFQKGNVANQREHLILLLANI 279


>ref|XP_002300874.1| predicted protein [Populus trichocarpa] gi|222842600|gb|EEE80147.1|
           predicted protein [Populus trichocarpa]
          Length = 1940

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/120 (61%), Positives = 88/120 (73%)
 Frame = +2

Query: 2   KTVVPDGRVEEEVNRYAREVEKKKEHYTPYNILPLDALGTPPAIMELPEIKAALHALRKV 181
           +TVVP G+V+ E  +YA +VE+K+  Y  YNILPL A G  PAIMELPEIKAALHA+R +
Sbjct: 162 QTVVPTGKVDNETRKYADDVERKRGQYEHYNILPLYAAGVKPAIMELPEIKAALHAIRDL 221

Query: 182 DNLPKPMVQSTNNGQDSSSRPEEGSKPVNDLLDWLWLTFGFQKGNVANQREHLILLLANV 361
           DNLP P +  T     S   P+E  K VND+LDWL   FGFQ+GNVANQREHLILLLAN+
Sbjct: 222 DNLPMPRI--TLPHVSSDDLPKESVKSVNDILDWLSSIFGFQRGNVANQREHLILLLANM 279


>ref|XP_002889606.1| hypothetical protein ARALYDRAFT_470669 [Arabidopsis lyrata subsp.
           lyrata] gi|297335448|gb|EFH65865.1| hypothetical protein
           ARALYDRAFT_470669 [Arabidopsis lyrata subsp. lyrata]
          Length = 1937

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/120 (60%), Positives = 88/120 (73%)
 Frame = +2

Query: 2   KTVVPDGRVEEEVNRYAREVEKKKEHYTPYNILPLDALGTPPAIMELPEIKAALHALRKV 181
           KTVVP  R++E+  RYA+EVE+KKE Y  YNILPL ALG   A+MELPEIKAA+ A+  V
Sbjct: 167 KTVVPQARIDEKTLRYAKEVERKKEQYEHYNILPLYALGAKTAVMELPEIKAAILAVCNV 226

Query: 182 DNLPKPMVQSTNNGQDSSSRPEEGSKPVNDLLDWLWLTFGFQKGNVANQREHLILLLANV 361
           DNLP+P   S +   D   R  E  +  ND+L+WL L FGFQ+GNVANQREHLILLLAN+
Sbjct: 227 DNLPRPRFHSASANLDEVGR--ERGRSFNDILEWLALVFGFQRGNVANQREHLILLLANI 284


>gb|ADK87343.1| callose synthase 7 [Arabidopsis thaliana]
          Length = 1933

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/120 (60%), Positives = 88/120 (73%)
 Frame = +2

Query: 2   KTVVPDGRVEEEVNRYAREVEKKKEHYTPYNILPLDALGTPPAIMELPEIKAALHALRKV 181
           KTVVP  R++++  RYA+EVE+KKE Y  YNILPL ALG   A+MELPEIKAA+ A+  V
Sbjct: 168 KTVVPQARIDDKTLRYAKEVERKKEQYEHYNILPLYALGAKTAVMELPEIKAAILAVCNV 227

Query: 182 DNLPKPMVQSTNNGQDSSSRPEEGSKPVNDLLDWLWLTFGFQKGNVANQREHLILLLANV 361
           DNLP+P   S +   D   R  E  +  ND+L+WL L FGFQ+GNVANQREHLILLLAN+
Sbjct: 228 DNLPRPRFHSASANLDEVDR--ERGRSFNDILEWLALVFGFQRGNVANQREHLILLLANI 285


Top