BLASTX nr result

ID: Coptis21_contig00040237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040237
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606366.1| CNGC5-like protein [Medicago truncatula] gi|...   162   3e-38
ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ...   161   6e-38
emb|CBI16330.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ...   160   1e-37
ref|XP_003540759.1| PREDICTED: putative cyclic nucleotide-gated ...   157   7e-37

>ref|XP_003606366.1| CNGC5-like protein [Medicago truncatula]
           gi|355507421|gb|AES88563.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 685

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/106 (77%), Positives = 89/106 (83%)
 Frame = +3

Query: 3   SLFVDPLFFYLPGVQEETCIDIGMLLETVLTIIRSMADVFYVIQIFFRLRTAYVAPSSRV 182
           SLFVDPLFFYLP VQ+E CIDIG+ +E  L IIRS+ADVFYVI IF R  TAYVAPSSRV
Sbjct: 81  SLFVDPLFFYLPIVQDEVCIDIGIAVEVFLIIIRSIADVFYVIHIFMRFHTAYVAPSSRV 140

Query: 183 FGRGELVIDPSKIASKYLRKWFLLDLVAALPLPQVIIWGVIPNLLG 320
           FGRGELVID SKIAS+YL K F LD +AALPLPQV+IW VIPNL G
Sbjct: 141 FGRGELVIDSSKIASRYLHKGFFLDFIAALPLPQVLIWIVIPNLGG 186


>ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Cucumis sativus] gi|449516804|ref|XP_004165436.1|
           PREDICTED: putative cyclic nucleotide-gated ion channel
           15-like [Cucumis sativus]
          Length = 720

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/106 (74%), Positives = 91/106 (85%)
 Frame = +3

Query: 3   SLFVDPLFFYLPGVQEETCIDIGMLLETVLTIIRSMADVFYVIQIFFRLRTAYVAPSSRV 182
           SLFVDPLFFYLP V+++ CIDIG+ LE VLT IRS+ADVFY IQIF + RTAYVAPSSRV
Sbjct: 120 SLFVDPLFFYLPAVRDKVCIDIGVGLEVVLTTIRSIADVFYTIQIFIKFRTAYVAPSSRV 179

Query: 183 FGRGELVIDPSKIASKYLRKWFLLDLVAALPLPQVIIWGVIPNLLG 320
           FGRGELVIDP KIA +YLR  F +DL+AA+P+PQV+IW VIPNL G
Sbjct: 180 FGRGELVIDPCKIAIRYLRHGFWIDLIAAVPVPQVLIWIVIPNLSG 225


>emb|CBI16330.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  160 bits (404), Expect = 1e-37
 Identities = 79/106 (74%), Positives = 92/106 (86%)
 Frame = +3

Query: 3   SLFVDPLFFYLPGVQEETCIDIGMLLETVLTIIRSMADVFYVIQIFFRLRTAYVAPSSRV 182
           SLFVDPLFFYLP V+++ C+DI + LE VLTIIRS+AD+FY+IQIF R RTAYVAPSSRV
Sbjct: 102 SLFVDPLFFYLPDVRDKVCMDIEIPLEVVLTIIRSIADIFYMIQIFVRFRTAYVAPSSRV 161

Query: 183 FGRGELVIDPSKIASKYLRKWFLLDLVAALPLPQVIIWGVIPNLLG 320
           FGRGELVID SKIA +YL K F +DL+AALPLPQV+IW +IPNL G
Sbjct: 162 FGRGELVIDTSKIALRYLGKGFWIDLIAALPLPQVLIWIIIPNLRG 207


>ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Vitis vinifera]
          Length = 713

 Score =  160 bits (404), Expect = 1e-37
 Identities = 79/106 (74%), Positives = 92/106 (86%)
 Frame = +3

Query: 3   SLFVDPLFFYLPGVQEETCIDIGMLLETVLTIIRSMADVFYVIQIFFRLRTAYVAPSSRV 182
           SLFVDPLFFYLP V+++ C+DI + LE VLTIIRS+AD+FY+IQIF R RTAYVAPSSRV
Sbjct: 102 SLFVDPLFFYLPDVRDKVCMDIEIPLEVVLTIIRSIADIFYMIQIFVRFRTAYVAPSSRV 161

Query: 183 FGRGELVIDPSKIASKYLRKWFLLDLVAALPLPQVIIWGVIPNLLG 320
           FGRGELVID SKIA +YL K F +DL+AALPLPQV+IW +IPNL G
Sbjct: 162 FGRGELVIDTSKIALRYLGKGFWIDLIAALPLPQVLIWIIIPNLRG 207


>ref|XP_003540759.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Glycine max]
          Length = 692

 Score =  157 bits (398), Expect = 7e-37
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = +3

Query: 3   SLFVDPLFFYLPGVQEETCIDIGMLLETVLTIIRSMADVFYVIQIFFRLRTAYVAPSSRV 182
           SLFVDPLFFYLP V++E CIDIG  LE  LT+IRSMADVFY+IQI  + RTAYVAPSSRV
Sbjct: 96  SLFVDPLFFYLPLVRDEVCIDIGTTLEVFLTMIRSMADVFYMIQILLKFRTAYVAPSSRV 155

Query: 183 FGRGELVIDPSKIASKYLRKWFLLDLVAALPLPQVIIWGVIPNLLG 320
           FGRG+LVID SKIA++YL K F LD VAALPLPQ +IW VIPNL G
Sbjct: 156 FGRGDLVIDSSKIATRYLIKGFWLDFVAALPLPQALIWIVIPNLGG 201


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