BLASTX nr result

ID: Coptis21_contig00040233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040233
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21310.3| unnamed protein product [Vitis vinifera]              200   2e-49
ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodies...   200   2e-49
ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
ref|XP_002514861.1| glycerophosphodiester phosphodiesterase, put...   191   1e-46
ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|2...   190   2e-46

>emb|CBI21310.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  200 bits (508), Expect = 2e-49
 Identities = 110/175 (62%), Positives = 133/175 (76%), Gaps = 5/175 (2%)
 Frame = -1

Query: 613 MALKAVHMSDVPNLDQVHDNPSL--YSTQL---VPKGRATSFLPPKFAVIGHRGNGMNML 449
           MALKAVH+SDVP LDQV +N SL  YST+    V  GR+ SF  PKF VIGHRG+GMNML
Sbjct: 1   MALKAVHVSDVPCLDQVPENASLGLYSTRFSAGVDVGRS-SFRIPKFLVIGHRGSGMNML 59

Query: 448 SSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQVTKXXXXXXXXXXXILTKENDIVYER 269
            SSD RMKAIKENSILSFNTAA+F+VD+VEFDVQVTK           I +++N +VYE+
Sbjct: 60  QSSDRRMKAIKENSILSFNTAAEFSVDFVEFDVQVTKDDIPVIFHDNFIFSEDNGVVYEK 119

Query: 268 RITELTLAEFLSCGPQQELGNVGKSLYRKAKDGRILSWMVENGDSHCTLQEAFQR 104
           R+TEL L++FL  GPQ+E G VGKS+ RK KDGRI++W VE  D  CTL+EAF++
Sbjct: 120 RVTELLLSDFLRYGPQREPGKVGKSMLRKTKDGRIVNWNVEADDCLCTLKEAFEK 174


>ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodiesterase GDE1 [Vitis
           vinifera] gi|147820259|emb|CAN71478.1| hypothetical
           protein VITISV_038621 [Vitis vinifera]
          Length = 382

 Score =  200 bits (508), Expect = 2e-49
 Identities = 110/175 (62%), Positives = 133/175 (76%), Gaps = 5/175 (2%)
 Frame = -1

Query: 613 MALKAVHMSDVPNLDQVHDNPSL--YSTQL---VPKGRATSFLPPKFAVIGHRGNGMNML 449
           MALKAVH+SDVP LDQV +N SL  YST+    V  GR+ SF  PKF VIGHRG+GMNML
Sbjct: 1   MALKAVHVSDVPCLDQVPENASLGLYSTRFSAGVDVGRS-SFRIPKFLVIGHRGSGMNML 59

Query: 448 SSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQVTKXXXXXXXXXXXILTKENDIVYER 269
            SSD RMKAIKENSILSFNTAA+F+VD+VEFDVQVTK           I +++N +VYE+
Sbjct: 60  QSSDRRMKAIKENSILSFNTAAEFSVDFVEFDVQVTKDDIPVIFHDNFIFSEDNGVVYEK 119

Query: 268 RITELTLAEFLSCGPQQELGNVGKSLYRKAKDGRILSWMVENGDSHCTLQEAFQR 104
           R+TEL L++FL  GPQ+E G VGKS+ RK KDGRI++W VE  D  CTL+EAF++
Sbjct: 120 RVTELLLSDFLRYGPQREPGKVGKSMLRKTKDGRIVNWNVEADDCLCTLKEAFEK 174


>ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|222839360|gb|EEE77697.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  197 bits (502), Expect = 1e-48
 Identities = 106/175 (60%), Positives = 129/175 (73%), Gaps = 5/175 (2%)
 Frame = -1

Query: 613 MALKAVHMSDVPNLDQVHDNPSL--YSTQL---VPKGRATSFLPPKFAVIGHRGNGMNML 449
           MALKAVH+SDVPNLD V DN SL  YST+L   V   RA +F  PKF V GHRGNGMN+L
Sbjct: 1   MALKAVHVSDVPNLDHVPDNASLSLYSTRLSKGVEMNRAATFKMPKFMVAGHRGNGMNVL 60

Query: 448 SSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQVTKXXXXXXXXXXXILTKENDIVYER 269
            S+DGRMK IKENSI+SFN+AAK  +D++EFDVQVTK           IL+++N  ++E+
Sbjct: 61  QSTDGRMKEIKENSIMSFNSAAKHPIDFIEFDVQVTKDDCPVIFHDNFILSEDNGTIFEK 120

Query: 268 RITELTLAEFLSCGPQQELGNVGKSLYRKAKDGRILSWMVENGDSHCTLQEAFQR 104
           R+TEL L+EFL  GPQ+E G  GKSL RK K+G+IL W VE  DS CTLQ+AFQ+
Sbjct: 121 RVTELCLSEFLCFGPQKE-GRAGKSLLRKTKEGKILEWNVEKDDSLCTLQDAFQQ 174


>ref|XP_002514861.1| glycerophosphodiester phosphodiesterase, putative [Ricinus
           communis] gi|223545912|gb|EEF47415.1|
           glycerophosphodiester phosphodiesterase, putative
           [Ricinus communis]
          Length = 388

 Score =  191 bits (485), Expect = 1e-46
 Identities = 102/180 (56%), Positives = 126/180 (70%), Gaps = 10/180 (5%)
 Frame = -1

Query: 613 MALKAVHMSDVPNLDQVHDNP--SLYSTQLV--------PKGRATSFLPPKFAVIGHRGN 464
           MALKAVH+SDVPNLDQV +N   SL ST+                +F  PKF V+GHRG+
Sbjct: 1   MALKAVHVSDVPNLDQVQENAALSLCSTRFTNICVNDHESGDHDVAFKFPKFVVMGHRGS 60

Query: 463 GMNMLSSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQVTKXXXXXXXXXXXILTKEND 284
           GMNML SSD RMK+I+ENSILSFN+AAK  +D++EFDVQVT+           ILT++  
Sbjct: 61  GMNMLQSSDRRMKSIRENSILSFNSAAKLPLDFIEFDVQVTRDGYPVIFHDNLILTEDKG 120

Query: 283 IVYERRITELTLAEFLSCGPQQELGNVGKSLYRKAKDGRILSWMVENGDSHCTLQEAFQR 104
            + E+R+T+LTLAEFLS GPQ+E GNVGK+L+RK KDG+I  W VE  D  CTLQE FQ+
Sbjct: 121 TIIEKRVTDLTLAEFLSYGPQKEAGNVGKTLFRKTKDGKIFEWKVEEDDPLCTLQEVFQK 180


>ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|222845909|gb|EEE83456.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  190 bits (483), Expect = 2e-46
 Identities = 99/170 (58%), Positives = 122/170 (71%)
 Frame = -1

Query: 613 MALKAVHMSDVPNLDQVHDNPSLYSTQLVPKGRATSFLPPKFAVIGHRGNGMNMLSSSDG 434
           MALKAVH+SDVPNLD V +N SL            +F  PKF V GHRGNGMN+L S+D 
Sbjct: 1   MALKAVHVSDVPNLDHVPENASLSLCS------TPAFKTPKFLVFGHRGNGMNILQSTDR 54

Query: 433 RMKAIKENSILSFNTAAKFNVDYVEFDVQVTKXXXXXXXXXXXILTKENDIVYERRITEL 254
           RMKAIKENSI+SFN+AAK  +D++EFDVQVTK           IL+ +N I++E+R+TEL
Sbjct: 55  RMKAIKENSIMSFNSAAKHPIDFIEFDVQVTKDDCPVIFHDDFILSVDNGIIFEKRVTEL 114

Query: 253 TLAEFLSCGPQQELGNVGKSLYRKAKDGRILSWMVENGDSHCTLQEAFQR 104
           +L+EFL  GPQ+E G  GKSL RK KDG+I+ W VE  DS CTLQ+AFQ+
Sbjct: 115 SLSEFLCYGPQKEAGKSGKSLVRKTKDGKIVEWNVEKDDSLCTLQDAFQQ 164


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