BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040230
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308421.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002528386.1| eukaryotic translation initiation factor 3 s...   126   2e-27
ref|XP_002325112.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257...   124   1e-26
emb|CBI36584.3| unnamed protein product [Vitis vinifera]              124   1e-26

>ref|XP_002308421.1| predicted protein [Populus trichocarpa] gi|222854397|gb|EEE91944.1|
           predicted protein [Populus trichocarpa]
          Length = 843

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/103 (64%), Positives = 73/103 (70%), Gaps = 17/103 (16%)
 Frame = +3

Query: 3   PHQSATARVPYGPRLSGGY-RTSNRALRNKPSFQTSEFTGDGQ-LSPPKIMNPHAAEFVP 176
           PHQSATARVPYGPRLSGG+ R+ NR  RNKPSF   E TGDG   SPP+IMNPHAAEFVP
Sbjct: 619 PHQSATARVPYGPRLSGGFNRSGNRVPRNKPSFNNGEHTGDGNHFSPPRIMNPHAAEFVP 678

Query: 177 GQPWVP--------------NGFPVSPNGFVVFPC-VPLTPNG 260
           GQPWVP              NG PVSPNGF + P  +P++PNG
Sbjct: 679 GQPWVPDGYSILQNGYMATTNGMPVSPNGFPISPTGIPVSPNG 721


>ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223532174|gb|EEF33979.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1888

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/89 (68%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3    PHQSATARVPYGPRLSGGY-RTSNRALRNKPSFQTSEFTGDGQ-LSPPKIMNPHAAEFVP 176
            PHQSATARVPYGPRLS  + R+ NR  RNKPSF   E  GDG   SPP+IMNPHAAEFVP
Sbjct: 1658 PHQSATARVPYGPRLSASFNRSGNRVPRNKPSFHNGEHNGDGNHFSPPRIMNPHAAEFVP 1717

Query: 177  GQPWVPNGFPVSPNGFVVFP-CVPLTPNG 260
            GQPWVPNG+PVS NG++  P  +P++PNG
Sbjct: 1718 GQPWVPNGYPVSANGYLANPNGMPVSPNG 1746


>ref|XP_002325112.1| predicted protein [Populus trichocarpa] gi|222866546|gb|EEF03677.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/103 (63%), Positives = 72/103 (69%), Gaps = 17/103 (16%)
 Frame = +3

Query: 3   PHQSATARVPYGPRLSGGYRTS-NRALRNKPSFQTSEFTGDGQ-LSPPKIMNPHAAEFVP 176
           PHQSATARVPYGPRLSGGY  S NR  RNKPSF   E TGDG   SPP+IMNPHAAEFVP
Sbjct: 417 PHQSATARVPYGPRLSGGYNKSGNRVPRNKPSFHNGEHTGDGNHFSPPRIMNPHAAEFVP 476

Query: 177 GQPWVPNGF--------------PVSPNGFVVFP-CVPLTPNG 260
            QPWVPNG+              PVSPNG+ + P  +P++PNG
Sbjct: 477 CQPWVPNGYPLQHNGYMATTNGMPVSPNGYPISPTSIPVSPNG 519


>ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera]
          Length = 1897

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3    PHQSATARVPYGPRLSGGY-RTSNRALRNKPSFQTSEFTGDGQ-LSPPKIMNPHAAEFVP 176
            PHQSATARVPYGPRLSGGY R+ NR  RNK  +   E  GD    + P++MNPHAAEFVP
Sbjct: 1663 PHQSATARVPYGPRLSGGYNRSGNRVPRNKTGYHNPEHNGDASPFTSPRVMNPHAAEFVP 1722

Query: 177  GQPWVPNGFPVSPNGFVVFP-CVPLTPNG 260
            GQPWVPNG+P+SPNG++  P  +PL+PNG
Sbjct: 1723 GQPWVPNGYPMSPNGYLASPNGIPLSPNG 1751


>emb|CBI36584.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   PHQSATARVPYGPRLSGGY-RTSNRALRNKPSFQTSEFTGDGQ-LSPPKIMNPHAAEFVP 176
           PHQSATARVPYGPRLSGGY R+ NR  RNK  +   E  GD    + P++MNPHAAEFVP
Sbjct: 121 PHQSATARVPYGPRLSGGYNRSGNRVPRNKTGYHNPEHNGDASPFTSPRVMNPHAAEFVP 180

Query: 177 GQPWVPNGFPVSPNGFVVFP-CVPLTPNG 260
           GQPWVPNG+P+SPNG++  P  +PL+PNG
Sbjct: 181 GQPWVPNGYPMSPNGYLASPNGIPLSPNG 209