BLASTX nr result

ID: Coptis21_contig00040225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040225
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137663.1| PREDICTED: DNA replication licensing factor ...   234   6e-60
ref|XP_002273675.1| PREDICTED: DNA replication licensing factor ...   233   9e-60
ref|XP_003529518.1| PREDICTED: DNA replication licensing factor ...   214   5e-54
ref|XP_003609791.1| DNA replication licensing factor mcm2 [Medic...   213   2e-53
dbj|BAC53939.1| MCM protein-like protein [Nicotiana tabacum]          212   3e-53

>ref|XP_004137663.1| PREDICTED: DNA replication licensing factor mcm2-like [Cucumis
            sativus] gi|449497179|ref|XP_004160335.1| PREDICTED: DNA
            replication licensing factor mcm2-like [Cucumis sativus]
          Length = 944

 Score =  234 bits (597), Expect = 6e-60
 Identities = 115/132 (87%), Positives = 123/132 (93%)
 Frame = -3

Query: 398  SFVVDSHFKSQPKGANLDDTSVNNSQGDSPASARPVDPEILSQDMLKKYITYAKLNVFPT 219
            +FVVDSHFKSQPKGANLDD S+N SQ DS  SARP+DPE+L QD+L+KYITY+KLNVFP 
Sbjct: 711  TFVVDSHFKSQPKGANLDDKSINESQEDSQDSARPLDPEVLPQDLLRKYITYSKLNVFPR 770

Query: 218  LHDADLNKFTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRMHVTQEDVDMA 39
            LHDADL+K THVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLR HVTQEDVDMA
Sbjct: 771  LHDADLDKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMA 830

Query: 38   IRVLLDSFISTQ 3
            IRVLLDSFISTQ
Sbjct: 831  IRVLLDSFISTQ 842


>ref|XP_002273675.1| PREDICTED: DNA replication licensing factor mcm2 [Vitis vinifera]
            gi|296085553|emb|CBI29285.3| unnamed protein product
            [Vitis vinifera]
          Length = 954

 Score =  233 bits (595), Expect = 9e-60
 Identities = 115/131 (87%), Positives = 122/131 (93%)
 Frame = -3

Query: 395  FVVDSHFKSQPKGANLDDTSVNNSQGDSPASARPVDPEILSQDMLKKYITYAKLNVFPTL 216
            FVVDSHFKSQPKG N++D S++NSQ D   SARP+DPEILSQD+LKKY+TYAKLNVFP L
Sbjct: 722  FVVDSHFKSQPKGTNVEDKSLSNSQDDIQPSARPLDPEILSQDLLKKYLTYAKLNVFPRL 781

Query: 215  HDADLNKFTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRMHVTQEDVDMAI 36
            HDADLNK THVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLR HVTQEDVDMAI
Sbjct: 782  HDADLNKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAI 841

Query: 35   RVLLDSFISTQ 3
            RVLLDSFISTQ
Sbjct: 842  RVLLDSFISTQ 852


>ref|XP_003529518.1| PREDICTED: DNA replication licensing factor mcm2-like [Glycine max]
          Length = 929

 Score =  214 bits (546), Expect = 5e-54
 Identities = 109/132 (82%), Positives = 117/132 (88%)
 Frame = -3

Query: 398  SFVVDSHFKSQPKGANLDDTSVNNSQGDSPASARPVDPEILSQDMLKKYITYAKLNVFPT 219
            +FVVDSHFKSQPKGAN DD S + SQ D  ASA P DPEIL Q +LKKYITYAKLN+FP 
Sbjct: 697  TFVVDSHFKSQPKGANQDDKSFSESQ-DVHASAMPADPEILPQQLLKKYITYAKLNIFPR 755

Query: 218  LHDADLNKFTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRMHVTQEDVDMA 39
            L DAD++K +HVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLR HVTQEDVDMA
Sbjct: 756  LQDADMDKLSHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMA 815

Query: 38   IRVLLDSFISTQ 3
            IRVLL+SFISTQ
Sbjct: 816  IRVLLESFISTQ 827


>ref|XP_003609791.1| DNA replication licensing factor mcm2 [Medicago truncatula]
            gi|355510846|gb|AES91988.1| DNA replication licensing
            factor mcm2 [Medicago truncatula]
          Length = 883

 Score =  213 bits (541), Expect = 2e-53
 Identities = 110/131 (83%), Positives = 116/131 (88%)
 Frame = -3

Query: 395  FVVDSHFKSQPKGANLDDTSVNNSQGDSPASARPVDPEILSQDMLKKYITYAKLNVFPTL 216
            FVVDSHFKSQPKGAN D  SV+ SQ    AS  P+DPEIL QD+LKKY+TYAKLNVFP L
Sbjct: 656  FVVDSHFKSQPKGANND--SVSESQD---ASGMPIDPEILPQDLLKKYVTYAKLNVFPRL 710

Query: 215  HDADLNKFTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRMHVTQEDVDMAI 36
            HDADLNK +HVYAELR+ESSHGQGVPIAVRHIESMIRMSEAHARMHLR HV QEDVDMAI
Sbjct: 711  HDADLNKLSHVYAELRKESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVIQEDVDMAI 770

Query: 35   RVLLDSFISTQ 3
            RVLLDSFISTQ
Sbjct: 771  RVLLDSFISTQ 781


>dbj|BAC53939.1| MCM protein-like protein [Nicotiana tabacum]
          Length = 865

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/131 (80%), Positives = 115/131 (87%)
 Frame = -3

Query: 395  FVVDSHFKSQPKGANLDDTSVNNSQGDSPASARPVDPEILSQDMLKKYITYAKLNVFPTL 216
            FVVDSHF+SQ KGA LD+ S  +S+ D+ A+  P DPEI+ Q++LKKYITYAKLNVFP L
Sbjct: 632  FVVDSHFRSQAKGATLDEKSFTDSRDDARAAMAPTDPEIIPQELLKKYITYAKLNVFPKL 691

Query: 215  HDADLNKFTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRMHVTQEDVDMAI 36
            HD DL+K T VYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLR HVTQEDVDMAI
Sbjct: 692  HDGDLDKLTQVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAI 751

Query: 35   RVLLDSFISTQ 3
            RVLLDSFISTQ
Sbjct: 752  RVLLDSFISTQ 762


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